Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3947 |
Symbol | |
ID | 4667531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4372564 |
End bp | 4373367 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639825135 |
Product | IclR family transcriptional regulator |
Protein accession | YP_972264 |
Protein GI | 120612586 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.251831 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGATA CCCCCACGGA TATTGGTAAA AACCCTAGGC CGGGCGACAG CTACGTGCAG TCGTTCGCCC GCGGGCTGGA AGTGATCCGT TCCTTCAGCG CCGCCGCGCC GCAGCAGACG TTGAGCGAAG TAGCGGCCTC ATCGGGCCTC ACGCGTGCGG GGGCGCGCCG CATCCTGCTC ACGCTGCAGA CGCTGGGCTA CGTGGAAAGC GACGGGCGGC TGTTCCGCCT CACGCCGCGC ATCATGGACC TGGGTTTCGC CTACCTCTCG TCCATGCCCA TCTGGGATCT CGCGGAGCCC TCCATGGAAG CGCTGGCCGG CGAGGTGCGC GAATCGTGCT CGGCCGCCGT GCTGGACGGG CACGACATCG TCTATGTGCT GCGCATCCAC ACCCACAAGA TCATGAGCAC CAACCTGGGC GTGGGCTCGC GCCTGCCCGC GTTCTGGACG TCCATGGGCC GCATGCTGCT GGCCGGCCTG CCCGACGAGC GCGTCATCGC GCTCATGAAC GACCTGCCAC GCAAGCGCTT CACGCCGCGC ACCGTGGTCG AGGACGCGGA ACTGCTCGCC CGTGTGCAGA CCGCCCGCGC GCAGGGCTGG TGCCTGATCG ACCAGGAACT GGAGGAAGGG CTGATCTCTG TCGCCGCCCC GCTGCGCGAC CGCGCCGGCC GCACGGTGGC CGCGCTCAAC ATCAGCGGAC AGGCCAACCG CACCAGCGCG AAGGTGATGC AGCGCGACCT GCTGCCCGTA CTGCTGCGCA CGGCCGACAC CATCTCTGGG CTGCTGGGCA CGCGGCGCGG CTGA
|
Protein sequence | MSDTPTDIGK NPRPGDSYVQ SFARGLEVIR SFSAAAPQQT LSEVAASSGL TRAGARRILL TLQTLGYVES DGRLFRLTPR IMDLGFAYLS SMPIWDLAEP SMEALAGEVR ESCSAAVLDG HDIVYVLRIH THKIMSTNLG VGSRLPAFWT SMGRMLLAGL PDERVIALMN DLPRKRFTPR TVVEDAELLA RVQTARAQGW CLIDQELEEG LISVAAPLRD RAGRTVAALN ISGQANRTSA KVMQRDLLPV LLRTADTISG LLGTRRG
|
| |