Gene Aave_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3947 
Symbol 
ID4667531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4372564 
End bp4373367 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content69% 
IMG OID639825135 
ProductIclR family transcriptional regulator 
Protein accessionYP_972264 
Protein GI120612586 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID[TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.251831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA CCCCCACGGA TATTGGTAAA AACCCTAGGC CGGGCGACAG CTACGTGCAG 
TCGTTCGCCC GCGGGCTGGA AGTGATCCGT TCCTTCAGCG CCGCCGCGCC GCAGCAGACG
TTGAGCGAAG TAGCGGCCTC ATCGGGCCTC ACGCGTGCGG GGGCGCGCCG CATCCTGCTC
ACGCTGCAGA CGCTGGGCTA CGTGGAAAGC GACGGGCGGC TGTTCCGCCT CACGCCGCGC
ATCATGGACC TGGGTTTCGC CTACCTCTCG TCCATGCCCA TCTGGGATCT CGCGGAGCCC
TCCATGGAAG CGCTGGCCGG CGAGGTGCGC GAATCGTGCT CGGCCGCCGT GCTGGACGGG
CACGACATCG TCTATGTGCT GCGCATCCAC ACCCACAAGA TCATGAGCAC CAACCTGGGC
GTGGGCTCGC GCCTGCCCGC GTTCTGGACG TCCATGGGCC GCATGCTGCT GGCCGGCCTG
CCCGACGAGC GCGTCATCGC GCTCATGAAC GACCTGCCAC GCAAGCGCTT CACGCCGCGC
ACCGTGGTCG AGGACGCGGA ACTGCTCGCC CGTGTGCAGA CCGCCCGCGC GCAGGGCTGG
TGCCTGATCG ACCAGGAACT GGAGGAAGGG CTGATCTCTG TCGCCGCCCC GCTGCGCGAC
CGCGCCGGCC GCACGGTGGC CGCGCTCAAC ATCAGCGGAC AGGCCAACCG CACCAGCGCG
AAGGTGATGC AGCGCGACCT GCTGCCCGTA CTGCTGCGCA CGGCCGACAC CATCTCTGGG
CTGCTGGGCA CGCGGCGCGG CTGA
 
Protein sequence
MSDTPTDIGK NPRPGDSYVQ SFARGLEVIR SFSAAAPQQT LSEVAASSGL TRAGARRILL 
TLQTLGYVES DGRLFRLTPR IMDLGFAYLS SMPIWDLAEP SMEALAGEVR ESCSAAVLDG
HDIVYVLRIH THKIMSTNLG VGSRLPAFWT SMGRMLLAGL PDERVIALMN DLPRKRFTPR
TVVEDAELLA RVQTARAQGW CLIDQELEEG LISVAAPLRD RAGRTVAALN ISGQANRTSA
KVMQRDLLPV LLRTADTISG LLGTRRG