| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3940 |
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| Symbol | |
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| ID | 4667060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4366673 |
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| End bp | 4367407 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639825128 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_972257 |
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| Protein GI | 120612579 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.114872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0870756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACTT CCACTGCTTC TTCCTCGCGC GAGCGCGTCC TCATCACCGG CGGCGGTGCC
GGCATCGGTG CGGCCACGGC CGAGCGCTGC CGCGCCGACG GCTACGAGCC GGTCGTCATC
GACCGCAGCG TGGACCACGT GCCCGGCGGC ATCCAGGCGG ACCTGTCCAA CCCCGCGGAA
ACGGCGCGCG CGCTGCAGCA GGCGCTGGCC GGCGGCCCGA TCACGCGCCT GGTCAACAAC
GTGGGCATCG TGGTGCCGGC CGAAGCGGCC GAGCAGACAC TGGAGCAGTT CGACCTGGCC
GTGGCGCTGA ACCTGCGCTG CAGCCTGCAG TGCATGCAGG CACTGCTGCC GGGCATGCAG
GCGGCGGGCT TCGGGCGCAT CGTGAACATG TCCTCGCGCG CCGCGCTGGG CAAGGAGCTG
CGTACCGCGT ACTCGGCCAC CAAGGCCGGC CTGATCGGCA TGACGCGTGT CTGGGCGCTG
GAGCTGGGCC GCCACGGCAT CACGGCCAAC GCCATCGGAC CGGGCCCCAT CCGCACCGAG
CTGTTCGACC GCGCGAACCC GCCCGATGCG CCGCGCACGC AGGCCATCAT CGATGCGGTG
CCCGTGAAGC GCGTGGGCAC GCCCGACGAC GTGGCGCATG CGGTGTCGTA CCTGCTCGAC
GAGCGCAGCG GCTTCGTCAC GGGGCAGGTC TTGTACGTCT GCGGAGGCAT GACGGTAGGG
GTGGCCGGGG TCTGA
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| Protein sequence | MTTSTASSSR ERVLITGGGA GIGAATAERC RADGYEPVVI DRSVDHVPGG IQADLSNPAE
TARALQQALA GGPITRLVNN VGIVVPAEAA EQTLEQFDLA VALNLRCSLQ CMQALLPGMQ
AAGFGRIVNM SSRAALGKEL RTAYSATKAG LIGMTRVWAL ELGRHGITAN AIGPGPIRTE
LFDRANPPDA PRTQAIIDAV PVKRVGTPDD VAHAVSYLLD ERSGFVTGQV LYVCGGMTVG
VAGV
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