| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3939 |
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| Symbol | |
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| ID | 4667336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4365262 |
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| End bp | 4366599 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639825127 |
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| Product | short chain fatty acid transporter |
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| Protein accession | YP_972256 |
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| Protein GI | 120612578 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2031] Short chain fatty acids transporter |
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| TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.506022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0313351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAAA TCACCGCTTT CTTCACCGAA CTGATGCGGC GCTACCTGCC CGATCCGTTC
GTCTTCGCGA TCCTGCTCAC GCTGCTGACC ATGGCGCTCG CCTTCGGCGT GGAGAGCCGC
CCGATCGATG CCGTGGTGCA GGACTGGGGC AAGGGCTTCT GGAGCCTGCT GGCCTTCACG
ACGCAGATGG CCGTGATCCT GGTGATGGGC TACGTGCTGG CGGCCGCGCC CATCGTGGAC
CGTTTCCTCG ACCGCATCGC CGCGCGCGTG AGCACGCCGC GCCAGGCCAT CATCGTCGCG
ACCCTCGTGG GCGGCGTGGG CAGCTACCTC AACTGGGGCT TCGGCCTGGT GATCGGCGGC
ATCATGGCGC GCAAGCTGGC GCTGAAGGTG AAGGGCGTGC ACTATCCGCT GATCATCGCG
GCCGCCTACA CGGGCTTCAC CATGTACAGC CTGGGCTTCT CGGCGACGAT CCCCGTGCTC
ATCTCCACCA AGGGCCATGC CTTCGAGGGC ACGATGGGCC TGATCCCGCT CACGCAGACG
ATCTTCTCCG CGCCCATCCT GCTCACCAGC CTGGCCGTGC TGGTCGCGCT GCCGCTGCTC
AATGCCGCCA TGCATCCCAG GCAGGGCGAG AAGGTGGTCG AGCTGGACCC GGCCACCGTG
GCGGAGGCCA GGCCCGCCGC CAGCGCAGAG GGGCTGCTGG GCGACGAGAA GACGCTGGCC
TGGCGCCTCA ACAACAGCCG CATGCTGAGC CTGCTGATCG GCCTGTGCGG CATGGCGTAC
GTGGTCATGC ACTTCGTGCG CGGCGGCAAC CTCGACCTGA ACATGATCAA CTTCTTCATC
CTGTTCCTCG GGGTGCTGCT GCTGGGCACG CCGATGAAGT ACGTGGAGAA GGTCAACGAG
GGCGTGAAGA CGATCGGCGG GATCATCCTG CAGTTCCCGT TCTACGCCGG CATCATGGCG
ATCATGCACG GCTCGGGGCT GGTGGAATCG ATCGCGCACG TGTTCGTGAA CATCTCCACC
GCGGCCACGC TGCCGCTCTG GGGCCTCGTC AGTTCCTTCG TGATCAACTT CTTCGCGCCC
TCGGGCGGCG GCCACTGGGT GCTGCAGGGC CCGTTCATGA TCAACGCGGC CACCACCCTC
GGCGCGTCGC AGGCGCAGAC GGCCATGTCG GTGATGCTGG GCAACGGCTG GAACGACCTC
GTGCAGCCGT TCTGGATCCT GCCGGCGCTG GCGCTGTCCA AGCTCAAGCT GAAAGACATC
ATGGGCTACA CGGTGGTTTC CATGCTGCTC GTGGGCGCCA TCTACGCCGT GACCATGCTG
GTCTGGCCGG ACCTCTGA
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| Protein sequence | MSKITAFFTE LMRRYLPDPF VFAILLTLLT MALAFGVESR PIDAVVQDWG KGFWSLLAFT
TQMAVILVMG YVLAAAPIVD RFLDRIAARV STPRQAIIVA TLVGGVGSYL NWGFGLVIGG
IMARKLALKV KGVHYPLIIA AAYTGFTMYS LGFSATIPVL ISTKGHAFEG TMGLIPLTQT
IFSAPILLTS LAVLVALPLL NAAMHPRQGE KVVELDPATV AEARPAASAE GLLGDEKTLA
WRLNNSRMLS LLIGLCGMAY VVMHFVRGGN LDLNMINFFI LFLGVLLLGT PMKYVEKVNE
GVKTIGGIIL QFPFYAGIMA IMHGSGLVES IAHVFVNIST AATLPLWGLV SSFVINFFAP
SGGGHWVLQG PFMINAATTL GASQAQTAMS VMLGNGWNDL VQPFWILPAL ALSKLKLKDI
MGYTVVSMLL VGAIYAVTML VWPDL
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