| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3938 |
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| Symbol | |
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| ID | 4666836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4364925 |
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| End bp | 4365209 |
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| Gene Length | 285 bp |
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| Protein Length | 94 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639825126 |
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| Product | muconolactone delta-isomerase |
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| Protein accession | YP_972255 |
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| Protein GI | 120612577 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4829] Muconolactone delta-isomerase |
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| TIGRFAM ID | [TIGR03221] muconolactone delta-isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.358097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0505497 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGTTCA TGGCCGAAAT GACCGTCCGC ATCCCGTCCA CGCTCGCCCC CGAAGTGGCC
GACGAGATCA AGCGCAAGGA AAAGGAGTAT TCGCAGCAGC TGCAGCGGGA CGGCAAGTGG
CGCCACCTGT GGCGCGTCGT CGGCGAATAC GCCAACGTGA GCATCTTCGA CGTGTCCGGC
AACGACGAGC TGCACACGAT CCTGAGCGGG CTGCCGCTGT TCCCGTACAT GGAGATCAAA
GTGACGCCGC TGGCCAACCA CCCGTCGTCC ATCGTGCAGG AGTGA
|
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| Protein sequence | MLFMAEMTVR IPSTLAPEVA DEIKRKEKEY SQQLQRDGKW RHLWRVVGEY ANVSIFDVSG
NDELHTILSG LPLFPYMEIK VTPLANHPSS IVQE
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