Gene Aave_3935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3935 
Symbol 
ID4666913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4361141 
End bp4362007 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content67% 
IMG OID639825123 
ProductNmrA family protein 
Protein accessionYP_972252 
Protein GI120612574 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00694182 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATCCTGG TTTGTGGAGC CACCGGCGGC ATCGGCGGTG AATTGTGCAA GCTGCTGAAG 
GCGGCAGGAG CGCCTTTTCG CGCCATGGCG CGCAGGCAGG AACAGGTGGA CAGGTTCAGG
CAACAGGGCA TGGATGCCGT GCTCGGCGAC TTCGACAGGC CCGAGACGCT CGCAGCGGCC
ATGCAGGGCT GCGACACGAT GTTCCTCATC ACGCCGCCCA ACCCCGACCA GTTCACCCAG
GAAACGGGCG CCATCGACGC CGCGAAGCGC GCGGGCGTGG GCCGGGTCGT GAAGATTTCC
GCCTCCGATG GCAATGTGCG CACGCCGGTT CCGTGGGCAC GCACCCACGC GCTCATCGAC
CACCACCTGC GCGCCGCGGG TATCGGCTGG ACCCTCCTGA AGCCCACCGC CTTCATGCAG
AACTTCCTGT GGTTCAAGAA GCCGATCGCC AAGGGCTTTC TGCCCCAGGT GACGGGCGAC
GGGTCGGTGT CATGGGTCGA TACCCGTGAC GTGGCCCGCG TCGCCGCCGC CGTTCTGACC
CAGGAGGGCC ACGCAGGGGC CACCTACTTC CTGACCGGGC CGGAAACGCT GGACACGCAC
GAGGCGGCGA AGCGGCTGTC GCACGTGACC GGACACCAGG TGCGCTACCT GAACCTGCCG
ACGTTCGTGT TCCGTGCCAT GCTGCGGCTG ACCGGCAACT CCGCCTGGAT GGCCAGGGGC
CTGGTCGTGC AGTTCGCGGA CGTCGTGGCC GGCCACCACG ACATCGATCC GACCTTCGAA
ATCGAGCGCC TCACCGGCCA GCCTGCGCGC CGGTTCGACG ATTTCATTCG CGATCACCGC
GATGCGTTTG CCCGGCATGG CTCGTAA
 
Protein sequence
MILVCGATGG IGGELCKLLK AAGAPFRAMA RRQEQVDRFR QQGMDAVLGD FDRPETLAAA 
MQGCDTMFLI TPPNPDQFTQ ETGAIDAAKR AGVGRVVKIS ASDGNVRTPV PWARTHALID
HHLRAAGIGW TLLKPTAFMQ NFLWFKKPIA KGFLPQVTGD GSVSWVDTRD VARVAAAVLT
QEGHAGATYF LTGPETLDTH EAAKRLSHVT GHQVRYLNLP TFVFRAMLRL TGNSAWMARG
LVVQFADVVA GHHDIDPTFE IERLTGQPAR RFDDFIRDHR DAFARHGS