Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3935 |
Symbol | |
ID | 4666913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4361141 |
End bp | 4362007 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639825123 |
Product | NmrA family protein |
Protein accession | YP_972252 |
Protein GI | 120612574 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00694182 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATCCTGG TTTGTGGAGC CACCGGCGGC ATCGGCGGTG AATTGTGCAA GCTGCTGAAG GCGGCAGGAG CGCCTTTTCG CGCCATGGCG CGCAGGCAGG AACAGGTGGA CAGGTTCAGG CAACAGGGCA TGGATGCCGT GCTCGGCGAC TTCGACAGGC CCGAGACGCT CGCAGCGGCC ATGCAGGGCT GCGACACGAT GTTCCTCATC ACGCCGCCCA ACCCCGACCA GTTCACCCAG GAAACGGGCG CCATCGACGC CGCGAAGCGC GCGGGCGTGG GCCGGGTCGT GAAGATTTCC GCCTCCGATG GCAATGTGCG CACGCCGGTT CCGTGGGCAC GCACCCACGC GCTCATCGAC CACCACCTGC GCGCCGCGGG TATCGGCTGG ACCCTCCTGA AGCCCACCGC CTTCATGCAG AACTTCCTGT GGTTCAAGAA GCCGATCGCC AAGGGCTTTC TGCCCCAGGT GACGGGCGAC GGGTCGGTGT CATGGGTCGA TACCCGTGAC GTGGCCCGCG TCGCCGCCGC CGTTCTGACC CAGGAGGGCC ACGCAGGGGC CACCTACTTC CTGACCGGGC CGGAAACGCT GGACACGCAC GAGGCGGCGA AGCGGCTGTC GCACGTGACC GGACACCAGG TGCGCTACCT GAACCTGCCG ACGTTCGTGT TCCGTGCCAT GCTGCGGCTG ACCGGCAACT CCGCCTGGAT GGCCAGGGGC CTGGTCGTGC AGTTCGCGGA CGTCGTGGCC GGCCACCACG ACATCGATCC GACCTTCGAA ATCGAGCGCC TCACCGGCCA GCCTGCGCGC CGGTTCGACG ATTTCATTCG CGATCACCGC GATGCGTTTG CCCGGCATGG CTCGTAA
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Protein sequence | MILVCGATGG IGGELCKLLK AAGAPFRAMA RRQEQVDRFR QQGMDAVLGD FDRPETLAAA MQGCDTMFLI TPPNPDQFTQ ETGAIDAAKR AGVGRVVKIS ASDGNVRTPV PWARTHALID HHLRAAGIGW TLLKPTAFMQ NFLWFKKPIA KGFLPQVTGD GSVSWVDTRD VARVAAAVLT QEGHAGATYF LTGPETLDTH EAAKRLSHVT GHQVRYLNLP TFVFRAMLRL TGNSAWMARG LVVQFADVVA GHHDIDPTFE IERLTGQPAR RFDDFIRDHR DAFARHGS
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