Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3916 |
Symbol | |
ID | 4666048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4337973 |
End bp | 4339844 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639825104 |
Product | glutathione-regulated potassium-efflux system protein KefC |
Protein accession | YP_972233 |
Protein GI | 120612555 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0475] Kef-type K+ transport systems, membrane components |
TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.255576 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCACG CACCCACCTG GCTCACCTAC GGATTCCTCT ACCTCGGCGC CGCCGTACTG GCAGTGCCCA TCGCGCGCGC ACTCGGGCTC GGCGCCATCA TCGGCTATCT CGCGGCCGGC ATTGCCATCG GCCCGTGGGG CCTGGGCCTG GTGAGCAATG TGCAGGACAT CCTGCATTTC GCCGAGTTCG GCGTGGTGCT GATGCTGTTC CTCGTGGGGC TGGAGCTGCA GCCGAGCCGC CTCTGGAGCC TGCGGCGGCC GATCTTCGGG CTCGGCAGCG CGCAGGTGCT GGGCTGCGCG GCCCTGCTGT GGGCGGTGGC CTGGGCCTGC GGGCTGCCGT GGCGCGTGGC GCTGGTCGGG GCGCTGGGGC TGGCGCTGTC GTCCACCGCG ATCGCGCTGC AGGTGCTGGC CGAGCGCAAC CTGATGCGCA CGGACAGCGG GCAGAAGGCG TTCTCGATCC TGCTCTTCCA GGACGTGGCG GCCATCCCCA TCCTCGCGCT GCTGCCGCTG CTGGCCGCCG GCGCGGAGGG CGCGGGCGGC GCGGCGCAGC CCCACACGGC CAGCGGCCTG GCGCTGGAGG CCGCGAAGAT CGTCGGCGTG GTGGGCGGGA TCGTGCTGGG CGGGCGCCTG CTGCTGCGCC CGCTGCTGCG CTGGATCGCG CGCAGCCGCA CGCCGGAGAT CTTCACGGCC GCGGCGCTGC TGCTGGTGGT CGCCACGGCC ATGCTGATGC TGGCCGTGGG CCTGTCGATG GCGCTGGGCG CCTTCCTCGC CGGCGTGCTG CTGGCCGAGA GCGAATACCG CCGCGAGCTG GAAACCGACC TGGAGCCGTT CAAGGGCCTG CTGCTGGGCC TGTTCTTCAT GGCCGTGGGC ATGACCATCG ACTTCGGCGT GCTGATGCGC TCGCCCTGGA CCATGCTGGC GCTGCTGTTC GGCTTCCTTG CCGTGAAGGC GGTGGTGATC CACACGCTCG CGCGCGCCAC GGGCATGGCC TACCAGGAGC GGCCGGTGTT CACGCTGCTG CTGGCGCAGG GGGGCGAGTT CGCGTTCGTG GTGTTCCAGA CGGCCGCGGG CGCGGGGGCC ATCCCGGCCG AGACGTCCTC GCTGCTCATC GGCGCGGTGG CGCTGTCGAT GCTGCTCAGC CCGCTGCTGC TCACCGCGCT CGACCGCGTG CTGCTGCGGC GCCATGCGCG CCTGGGCACC GAGCCACCGC CGGACGTGGA GGAGATCTCC GAGCCGCAGG AAGCGCCGGT GATCATCGCG GGCTTCGGCC GGTACGGGCA GATCGTGGCG CGCATGATGC TGGCGCAGGG CGTGCCGGCC ACGGTGCTGG ACCACAGCGT GGACATGCTG GAGGTGGCGC ACACCTTCGG CTACCGCGTG TTCTACGGCG ACGCCACGCG GCTGGACCTG CTGCGCATCG CGGGCGCGGC GCAGGCGCGC GTGCTGGTGG TGGCGGTGGA CGACACCGAG CAGTCGCTCA AGATCGTGAA GATCGCGCGC AAGCATTTTC CGCAGCTGCA GATCGTGGCC CGCGCGCGCG ACGTGACGCA CTGGAACGCG CTGCGCGACC TGGGCGTGAC GCGGGTCGAG CGCGAGGTGT TCGAGTCCAG CCTGAAGACC GCGCGCACCG TGCTGGAGGT GATGGGCATG CCCGCCGCGC AGGCCGAGGC GCTGGCGAAC CGCTTCCGCC ACCACAACAT CGCCCTGGCC GACCGCATGT ACCCCCACCA CAAGGACCGC GCGAAAATGA TCGCCGTGGC CCAGCAGGGC CGCCAGCAAC TGGTGGAACA GATGGCCAAG GAGCGGCAGG AAATCGCCGC TGCCGCGGCG CAATCGGAGC AAGGTGGGGG CCTGCCGCCG GGCAGGCACT GA
|
Protein sequence | MAHAPTWLTY GFLYLGAAVL AVPIARALGL GAIIGYLAAG IAIGPWGLGL VSNVQDILHF AEFGVVLMLF LVGLELQPSR LWSLRRPIFG LGSAQVLGCA ALLWAVAWAC GLPWRVALVG ALGLALSSTA IALQVLAERN LMRTDSGQKA FSILLFQDVA AIPILALLPL LAAGAEGAGG AAQPHTASGL ALEAAKIVGV VGGIVLGGRL LLRPLLRWIA RSRTPEIFTA AALLLVVATA MLMLAVGLSM ALGAFLAGVL LAESEYRREL ETDLEPFKGL LLGLFFMAVG MTIDFGVLMR SPWTMLALLF GFLAVKAVVI HTLARATGMA YQERPVFTLL LAQGGEFAFV VFQTAAGAGA IPAETSSLLI GAVALSMLLS PLLLTALDRV LLRRHARLGT EPPPDVEEIS EPQEAPVIIA GFGRYGQIVA RMMLAQGVPA TVLDHSVDML EVAHTFGYRV FYGDATRLDL LRIAGAAQAR VLVVAVDDTE QSLKIVKIAR KHFPQLQIVA RARDVTHWNA LRDLGVTRVE REVFESSLKT ARTVLEVMGM PAAQAEALAN RFRHHNIALA DRMYPHHKDR AKMIAVAQQG RQQLVEQMAK ERQEIAAAAA QSEQGGGLPP GRH
|
| |