Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3902 |
Symbol | |
ID | 4665420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 4325399 |
End bp | 4326250 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639825090 |
Product | hypothetical protein |
Protein accession | YP_972219 |
Protein GI | 120612541 |
COG category | [S] Function unknown |
COG ID | [COG3346] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00331503 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCCCA TTATCCGCAA GCGCACCGAT GGCGCCAGGG GTTTCCGCCC GGACTGGCGC TTCTGGTGCA TCACCGCCGC CGCGGTCGCC GCCATGGCCG CCACCGCGGC GCTCGGCCGC TGGCAGCTCG CGCGCGCGGC GGAGAAGCAG GCCTGGCAGG CCATGATCGA TGCGCGGCAG GCGATGCCGC CCGTGCCCGC CGCGGCCCTG GCCTCCCTGC CGCCCGTTGC CGGCCCGGAA AGCGGCAGCC CGGCCATGCC CGCCGCCGAG GCCCTCGTGC ACCGCCCGGC GGTGCTCCGG GGCCGCTGGC TGGCGCAGGA CACGGTCTTC CTCGACAACC GGCAGATGCA GGGCCGCCCC GGATTCTTCG TCGTCACGCC GCTGCGGCTC ACCTCGCCGG GCGCCGAGGG GGCGGTGGTG CTGGTGCAGC GCGGATGGGT GCCGCGCGAT TTCCAGGACC GCACACGCCT GCCCGCGGTG CCCGCGCCTT CGGAGGATGT CGAAGTGCAT GGCCGCATCG CGGCGGCGCC CTCGCGGCTC TACGAACCCG GCGGACCGGC TTCCGCCGCA GGCAGCGAGG GGTCTTCCCG CATCCGGCAG AATCTCGACC TGGCGGCCTA CCGCGCCGAG ACGGGGCTGC AGCGCCTCGC CCCCCTCACG GTGATCGAGA CGGGTGGGCC GGAAGGTCCG CTGCAGCGCG ACTGGCCGGC GGTCGATGCC GGGGTCGCCA GGCACCATGG CTACGCCTTC CAGTGGTTCG GGCTCTGCGC CCTCGTGGCA ATCCTCTATG TCTGGTTCCA AATCGTCCGA CGCTTCATTC GCCCAGGCCG CCAGCCGGCC CCCCCTGCCT GA
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Protein sequence | MQPIIRKRTD GARGFRPDWR FWCITAAAVA AMAATAALGR WQLARAAEKQ AWQAMIDARQ AMPPVPAAAL ASLPPVAGPE SGSPAMPAAE ALVHRPAVLR GRWLAQDTVF LDNRQMQGRP GFFVVTPLRL TSPGAEGAVV LVQRGWVPRD FQDRTRLPAV PAPSEDVEVH GRIAAAPSRL YEPGGPASAA GSEGSSRIRQ NLDLAAYRAE TGLQRLAPLT VIETGGPEGP LQRDWPAVDA GVARHHGYAF QWFGLCALVA ILYVWFQIVR RFIRPGRQPA PPA
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