Gene Aave_3902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3902 
Symbol 
ID4665420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4325399 
End bp4326250 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content74% 
IMG OID639825090 
Producthypothetical protein 
Protein accessionYP_972219 
Protein GI120612541 
COG category[S] Function unknown 
COG ID[COG3346] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00331503 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCCA TTATCCGCAA GCGCACCGAT GGCGCCAGGG GTTTCCGCCC GGACTGGCGC 
TTCTGGTGCA TCACCGCCGC CGCGGTCGCC GCCATGGCCG CCACCGCGGC GCTCGGCCGC
TGGCAGCTCG CGCGCGCGGC GGAGAAGCAG GCCTGGCAGG CCATGATCGA TGCGCGGCAG
GCGATGCCGC CCGTGCCCGC CGCGGCCCTG GCCTCCCTGC CGCCCGTTGC CGGCCCGGAA
AGCGGCAGCC CGGCCATGCC CGCCGCCGAG GCCCTCGTGC ACCGCCCGGC GGTGCTCCGG
GGCCGCTGGC TGGCGCAGGA CACGGTCTTC CTCGACAACC GGCAGATGCA GGGCCGCCCC
GGATTCTTCG TCGTCACGCC GCTGCGGCTC ACCTCGCCGG GCGCCGAGGG GGCGGTGGTG
CTGGTGCAGC GCGGATGGGT GCCGCGCGAT TTCCAGGACC GCACACGCCT GCCCGCGGTG
CCCGCGCCTT CGGAGGATGT CGAAGTGCAT GGCCGCATCG CGGCGGCGCC CTCGCGGCTC
TACGAACCCG GCGGACCGGC TTCCGCCGCA GGCAGCGAGG GGTCTTCCCG CATCCGGCAG
AATCTCGACC TGGCGGCCTA CCGCGCCGAG ACGGGGCTGC AGCGCCTCGC CCCCCTCACG
GTGATCGAGA CGGGTGGGCC GGAAGGTCCG CTGCAGCGCG ACTGGCCGGC GGTCGATGCC
GGGGTCGCCA GGCACCATGG CTACGCCTTC CAGTGGTTCG GGCTCTGCGC CCTCGTGGCA
ATCCTCTATG TCTGGTTCCA AATCGTCCGA CGCTTCATTC GCCCAGGCCG CCAGCCGGCC
CCCCCTGCCT GA
 
Protein sequence
MQPIIRKRTD GARGFRPDWR FWCITAAAVA AMAATAALGR WQLARAAEKQ AWQAMIDARQ 
AMPPVPAAAL ASLPPVAGPE SGSPAMPAAE ALVHRPAVLR GRWLAQDTVF LDNRQMQGRP
GFFVVTPLRL TSPGAEGAVV LVQRGWVPRD FQDRTRLPAV PAPSEDVEVH GRIAAAPSRL
YEPGGPASAA GSEGSSRIRQ NLDLAAYRAE TGLQRLAPLT VIETGGPEGP LQRDWPAVDA
GVARHHGYAF QWFGLCALVA ILYVWFQIVR RFIRPGRQPA PPA