| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3900 |
|---|
| Symbol | |
|---|
| ID | 4665446 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 4323432 |
|---|
| End bp | 4324646 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639825088 |
|---|
| Product | cytochrome oxidase assembly |
|---|
| Protein accession | YP_972217 |
|---|
| Protein GI | 120612539 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1612] Uncharacterized protein required for cytochrome oxidase assembly |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.733003 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCG CCCAGCCGCT CTACGATTTC GCGCCGCTCG CCGAACTGAT GCTGCTCGGC
CTCGCGATCG CCCTCGGCCC GCTGGCCTGG GTGGCATGGC GCAACCGCCA TGGTTCGCCC
GTGCGGCGCT GGCAGGCGCT GGCGATCCTC ACGCTCTTCC TCACGTTCGA CCTGGTACTG
TTCGGCGCCT TCACCCGGCT CACCGATTCC GGCCTGGGCT GCCCCGACTG GCCCGGCTGC
TACGGCAATG CGAGCCCGGT GGGCGCCCGC GCGGAAATCT CCGCCGCCCA GGAAGCCATG
CCCACCGGCC CGGTCACGCA CCGCAAGGCG TGGGTGGAGA TGGTCCACCG CTACCTGGCC
TCCGCGGTGG GCGTGCTCAT CATCGCGCTC ACGGCGGGGG CATGGTGGCA GTGGCGCCGC
AGCCGCCGGG CAGGCCCGGA TGCCGCGCAG GAGCGCATGG CCGTGCATCC CTGGTGGCCT
ACGGCCACGC TCGTGTGGGT CTGCCTGCAG GGAGCGTTCG GTGCCTGGAC GGTGACCATG
AAGCTTTTCC CCGCCATCGT CACGCTGCAC CTCGTCGGCG GCATCGTGCT GCTGGCCCTG
CTGTGCGTGC AGGCCGTGCG CCAGACCCAG GCTTCGCGCG GCATCGCGCC CGCCGCCCTC
GCACCGGGCC TGCGCGCGCT GCTCGTGCTG ACGGCGATGC TGGTGGGCCT GCAGATCCTG
CTGGGCGGCT GGGTGAGCAC CAACTACGCC GTCCTCGCCT GCTCCACCTT CCCCACCTGC
CAGGGCAACT GGTGGCCCGA CATGGCTTTC GCGGAGGGCT TCCAGATCTG GCGGCCCCTC
GGCCTGCTGC AGGACGGCAG CCACATCAGC TTCGCCGGCC TCACCGCCAT CCACTATGCG
CACCGGCTGG CGGCCTATGC CGTGCTGGCC GCGCTCGCCC TGCTGGCCTG GCGCCTGCGC
GCCGTGCCGG CGCTGCGGCC GCAGGCCCGC TGGCTGGCGG GGCTGGCGCT GCTGCAGTTC
GCCACCGGGC TGTCCAACGT CGTGCTCGAC TGGCCGCTGG TCGCCGCCGT GCTCCACACC
GGCGGCGCGG CCGCCCTCGT CGTCGCGCTC ACCTGGACCC TGGCCGCCAG CCGGGCCGTG
GGCGCCAGGG ACAAAATGTC CACCCCCCGC GCGATTGAAA CCGCCGCGGG CGCCCCGAGA
ATTTCTTCGC CATGA
|
|---|
| Protein sequence | MNAAQPLYDF APLAELMLLG LAIALGPLAW VAWRNRHGSP VRRWQALAIL TLFLTFDLVL
FGAFTRLTDS GLGCPDWPGC YGNASPVGAR AEISAAQEAM PTGPVTHRKA WVEMVHRYLA
SAVGVLIIAL TAGAWWQWRR SRRAGPDAAQ ERMAVHPWWP TATLVWVCLQ GAFGAWTVTM
KLFPAIVTLH LVGGIVLLAL LCVQAVRQTQ ASRGIAPAAL APGLRALLVL TAMLVGLQIL
LGGWVSTNYA VLACSTFPTC QGNWWPDMAF AEGFQIWRPL GLLQDGSHIS FAGLTAIHYA
HRLAAYAVLA ALALLAWRLR AVPALRPQAR WLAGLALLQF ATGLSNVVLD WPLVAAVLHT
GGAAALVVAL TWTLAASRAV GARDKMSTPR AIETAAGAPR ISSP
|
|---|
| |