Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3899 |
Symbol | |
ID | 4665094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 4322527 |
End bp | 4323435 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639825087 |
Product | protoheme IX farnesyltransferase |
Protein accession | YP_972216 |
Protein GI | 120612538 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.295694 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCCG CTTCCGCTTC CACCGCCCCC CAGGCGGTTT CGTCCCGCTT CTCGCAGTTC TACGCGCTGA CCAAGCCGCG CGTGGTCCAG CTCATCGTTT TCTGCGCATT CATCGGCATG GTGCTCGCGG TGCCCGGCCT GCCGAGCGGG GAGCAGTGGC TGCACATGGC CATCGCCTGC TTCGGGATCT GGCTGGTCGC CGGGGCCGCG GCCGCCTTCA ACTGCCTCGT GGAGCAGCAC ATCGACGCCA GGATGAACCG CACCGCCTGG CGCCCCACGG CCAAGGGCGA ACTCTCCAAC GCCCAGACGC TCGCTTTCTC GGCCCTGCTG TGCCTGGCCG GCTCGCTCGT GCTCTTCGTC TGGGTCAATG CGCTCACCAT GTGGCTCACC TTCGCCACCT TCGTGGGCTA CGCGGTCATC TACACCGTCG TGCTCAAGCC GCGCACGCCG CAGAACATCG TCATCGGCGG AGCCTCCGGC GCCATGCCGC CGGTGCTGGG CTGGGCGTCC ATGACGGGCG ACGTGGGGCC GGAGCCGCTG ATCCTCTTCC TCATCATCTT CCTCTGGACC CCGCCCCATT TCTGGGCGCT CGCCCTCTAC CGCGTGGAGG ACTACCGCAA GTCCGGCCTG CCCATGCTGC CCGTCACCCA CGGCAACGAG TTCACCCGCC TGCAGGTGCT GCTCTACACC TTCATCCTGT TCGCCGGCTG CCTGATGCCC TTCGTGTACG GCATGAGCTC CTGGATCTAC CTGGCCGCGG CGGTGGTGCT CTGCACCGGC TTCTGCGCTT ATGCCTTCCG CCTCTGGCGC AACTATTCCG ACGCGCTCGC GCGCAAGACC TTCCGCTTCT CCCTCATCCA CCTGAGCCTG CTTTTCGCGG CGCTGCTGGT GGACCATTAC GTGCTCTGA
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Protein sequence | MSAASASTAP QAVSSRFSQF YALTKPRVVQ LIVFCAFIGM VLAVPGLPSG EQWLHMAIAC FGIWLVAGAA AAFNCLVEQH IDARMNRTAW RPTAKGELSN AQTLAFSALL CLAGSLVLFV WVNALTMWLT FATFVGYAVI YTVVLKPRTP QNIVIGGASG AMPPVLGWAS MTGDVGPEPL ILFLIIFLWT PPHFWALALY RVEDYRKSGL PMLPVTHGNE FTRLQVLLYT FILFAGCLMP FVYGMSSWIY LAAAVVLCTG FCAYAFRLWR NYSDALARKT FRFSLIHLSL LFAALLVDHY VL
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