| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3894 |
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| Symbol | |
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| ID | 4665140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 4318313 |
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| End bp | 4319254 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639825082 |
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| Product | RNA polymerase, sigma 32 subunit, RpoH |
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| Protein accession | YP_972211 |
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| Protein GI | 120612533 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATTC AGTCTGGAAC CGCCGCCACT GCGCTTGCAC CGGTCAACGC CTGGGCGCTG
ATCCCCCCGC TGGGCAATCT GGATGCGTAC ATCTCCGCGG TGAACCGCCT GCCGATGCTC
ACGGCCGAGG AAGAGCGCAC CTACGCCCGC CGGCTGAAGG AGCACAACGA CGTGGAGGCC
GCGGGCCGGA TGGTGATGTC GCATCTGCGG CTGGTGGTTT CGATCGCCCG GCAGTACCTC
GGCTACGGCC TGCCGCATGG CGACCTGATC CAGGAGGGCA ACGTGGGCCT GATGAAAGCC
GTGAAACGCT TTGATCCGGA CCAGAACGTG CGCCTGGTGA GCTACGCCAT GCACTGGATC
AAGGCCGAGA TCCACGAGTA CATCCTGAAG AACTGGCGCA TGGTGAAGGT GGCCACCACC
AAGAGCCAGC GCAAGCTGTT CTTCAACCTG CGCTCGATGA AGCAGGGCTT CAAGGCCGAC
GCCGCCGCCG GGGACGCGGG CACGCACCGC GAGACGCTCT CCGAGCAGGA GATCGACGTC
GTGGCCCAGC AGCTCAACGT CAAGCGCGAG GAAGTCATCG AGATGGAAAC GCGCCTGTCG
GGAGGCGACG TGATGCTGGA CCCGGCCCCG TCCGATGACG GCGAACAGGC CTACGGACCC
ATCGCCTACC TGGCCGACGG CATGCACGAG CCGACCGCCA TGATCGAATC GCGCCAGCGC
GACGTGCTGG CCACGGACGG CATCGCCAAT GCCCTCGCTA CGCTGGACGA CCGGAGCCGC
CGCATCGTCG AGGAGCGCTG GCTCAAGGTC AACGACGACG GTTCGGGCGG CATGACGCTG
CATGAACTGG CTGCGGTGTA CGGCGTGAGC GCCGAGCGCA TCCGGCAGAT CGAGGTCGCC
GCGATGAAGA AGATGAAGAA GGCGCTGGCG GAATACGCCT GA
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| Protein sequence | MTIQSGTAAT ALAPVNAWAL IPPLGNLDAY ISAVNRLPML TAEEERTYAR RLKEHNDVEA
AGRMVMSHLR LVVSIARQYL GYGLPHGDLI QEGNVGLMKA VKRFDPDQNV RLVSYAMHWI
KAEIHEYILK NWRMVKVATT KSQRKLFFNL RSMKQGFKAD AAAGDAGTHR ETLSEQEIDV
VAQQLNVKRE EVIEMETRLS GGDVMLDPAP SDDGEQAYGP IAYLADGMHE PTAMIESRQR
DVLATDGIAN ALATLDDRSR RIVEERWLKV NDDGSGGMTL HELAAVYGVS AERIRQIEVA
AMKKMKKALA EYA
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