Gene Aave_3877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3877 
Symbol 
ID4666043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4300838 
End bp4301905 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content67% 
IMG OID639825067 
Product2-keto-3-deoxygluconate permease 
Protein accessionYP_972196 
Protein GI120612518 
COG category 
COG ID 
TIGRFAM ID[TIGR00793] 2-keto-3-deoxygluconate transporter 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCG CTATTTCCGC TGGCAAAGCG CACCGTTCCC AAGGCGCCCC GCAATATGCT 
CCCGCTGAGC GGCCAGCTCA ATACATCACC ATGAAAATCA AATCCACCAT CGAAAAGATA
CCGGGCGGCA TGATGCTCGT CCCGCTCCTG CTGGGAGCCG CGCTCCACAC AGTACGGCCG
GACACCGGCA AGTACTACGG CTCGTTCACG CAGGGGCTGA TCTCCGGCGT GGTGCCCATA
CTGGCCGTCT GGATGTTCTG CCTCGGGGCG TCCATCCATC TGCGGGCCAC GGGTGCCCTG
CTGCGCAAAT CAGGGGCGCT GGTCGGCGCC AAGATCGGCA CGGCCTGGCT GGCTGCGTGG
CTGCTCCCCC TGTGGATTCC TGTGGACGGC CTGCGCACCG GATTCTTCGC CGGGCTGTCG
GTGCTGGCCG TCGTGGCGGC GCTGGACATG ACCAACGGGG GCCTCTATGC GTCGATCATG
GAAGAGCACG GAACCCGCGA AGAAGCGGGC GTCTCGGTGC TGATCGGATT GGAATCGGGG
CCGCTGGTGA CCATGCTCAT CCTCGGCTCC ACCGGCCTCG CCGCATTCGA GCCCCGCCTG
CTGGTCGGCG TGGCCATTCC CTTCATCGCC GGCTTCGTGC TCGGCAATCT CGATCCCGAA
CTGCGAAGCT TCTTCTCTCC TGCCACGCGC GTCCTGATTC CCTTCTTCGC CTTCGCACTC
GGCAACACGA TCGACCTGCG CGTGGTGGTG GAAGCCGGGA TGCCGGGCAT CGCGATGGCG
CTGGCCGTCA TGGCCGTCTC GGGCACGGCC CTCGTTCTGG CGGACATCTT CATCGGCGGC
GGACGCGGCA CTGCGGGCAT CGCCGCGTCC AGCACCGCGG GCGCGGCAGT GGCCACGCCG
CACCTCGTCG CCCAGGCAGC ACCGCAGTTC GCTACCGTAG CGCCATCCGC GACGGCGCTG
GTCGCGGCAT GCGTCGTGAT CACCGCGGTG CTGGTTCCGC TCGCCTCCAC ATGGTGGGCT
TCCCGGGTGG CGCCCCGGAT TCACGCCATG GATGGGCAAC CATCATGA
 
Protein sequence
MNSAISAGKA HRSQGAPQYA PAERPAQYIT MKIKSTIEKI PGGMMLVPLL LGAALHTVRP 
DTGKYYGSFT QGLISGVVPI LAVWMFCLGA SIHLRATGAL LRKSGALVGA KIGTAWLAAW
LLPLWIPVDG LRTGFFAGLS VLAVVAALDM TNGGLYASIM EEHGTREEAG VSVLIGLESG
PLVTMLILGS TGLAAFEPRL LVGVAIPFIA GFVLGNLDPE LRSFFSPATR VLIPFFAFAL
GNTIDLRVVV EAGMPGIAMA LAVMAVSGTA LVLADIFIGG GRGTAGIAAS STAGAAVATP
HLVAQAAPQF ATVAPSATAL VAACVVITAV LVPLASTWWA SRVAPRIHAM DGQPS