Gene Aave_3868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3868 
Symbol 
ID4666610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4292534 
End bp4293613 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content68% 
IMG OID639825058 
Producthypothetical protein 
Protein accessionYP_972187 
Protein GI120612509 
COG category[S] Function unknown 
COG ID[COG4307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTTT TCAATTGCGA CCAATGCGGT CATCTCGTTT TCTTCGACAG CGTCCAGTGC 
CTCCACTGCG GCGCCAAGCT GGCGTTCCTG CCCGACCAGC TGACCATGGC TGCCCTGGTG
CCGGCCGTGC CGGGCCTGCA GGGCGATGCC GACCTGTGGC AGCGGGTGCC GTCGCGCCGC
CAGGGCAGCG CTTCACCGCT GTACCGGCTT TGCCACAACC GGATAGCGCA CGCCGCCTGC
AACTTCGCGG TGGCGGCCGA TGATCCGCAG CAGCTGTGCG GGTCCTGCCG CCAGACGCGC
ATCCTTCCCG ACCTTTCCGA ACCTGCCAAC CTGCGCCGCT GGAAACAGAT CGAGCATGCC
AAGCGGCAGC TCTACTACAC GCTCGCGCGC CTGGGCCTGC AGCCCGCGCC GGACGGTGCA
AGCCCGGTCT TCGAGTTCCT GGCCGACCAG CCCGGCCAAC CCGTGATGAC GGGACACGCC
GCCGGGACGA TCACGCTCAA CGTGGCCGAG GCGGACGACG ATGAACGGGC CCGGCGGCGG
CTCGCCCTGC ACGAACCCTA CCGCACCCTG CTGGGCCACC TGCGGCACGA ATCGGGACAC
TTCTACTGGG ACCATCTGCT GCTGGGCTCC GGCCGGCTGG AAGAGTTTCG CGCGGTCTTC
GGCGACGAGC GCCAGGACTA CGGCGCCGCC CTGCAGGCCT ACTACGCCAG CAGTCCGCAC
CTGGGCGCGT GGCGCGAACG CCATGTGAGC GCTTATGCCA CCGCCCACCC CTGGGAAGAC
TGGGCCGAGA CCTGGGCCCA TTACCTGCAC ATGGTGGATC TGCTGGAGAC GGCCGCCAGC
TATCACACGG GCCTCGATAT CCCCGAAAAC GGCGCCATCC AGACCTACCG CGTGGGCAAT
CCATTCGCCA GCGACCGGCC GGACTTCGAC GCGATGGTGC AGGAATGGGT GCCCCTGACG
CTGCTGCTCA ACAGCCTGAA CCGCAGCCTC GGGCAGCAGG ATGCCTACCC GTTCGCGCTG
TCGTCCGGCG CGCTGGCCAA GCTGCGCTTC GTGCACGACA TCGTGCACGC CACCGCCTGA
 
Protein sequence
MQVFNCDQCG HLVFFDSVQC LHCGAKLAFL PDQLTMAALV PAVPGLQGDA DLWQRVPSRR 
QGSASPLYRL CHNRIAHAAC NFAVAADDPQ QLCGSCRQTR ILPDLSEPAN LRRWKQIEHA
KRQLYYTLAR LGLQPAPDGA SPVFEFLADQ PGQPVMTGHA AGTITLNVAE ADDDERARRR
LALHEPYRTL LGHLRHESGH FYWDHLLLGS GRLEEFRAVF GDERQDYGAA LQAYYASSPH
LGAWRERHVS AYATAHPWED WAETWAHYLH MVDLLETAAS YHTGLDIPEN GAIQTYRVGN
PFASDRPDFD AMVQEWVPLT LLLNSLNRSL GQQDAYPFAL SSGALAKLRF VHDIVHATA