Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3859 |
Symbol | |
ID | 4666936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4285184 |
End bp | 4286623 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639825049 |
Product | C-terminal processing peptidase-3 |
Protein accession | YP_972178 |
Protein GI | 120612500 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.850584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCACA AACTCAAAAT CGCAGGATGG GTGTCGGTCG GCGTCGTTGC CGGCGCTCTG ACCACGGTCT CCCTGCAGAC CGTCGCCCGC GGAGCCATGG CTCCGCTTCC CCTCGAGGAA ATCCAGCAGC TCTCCGCGGT CTTCGGCCTC GTCAAGACCG ACTACGTCGA GCCCGTGGAC GACAAGAAGC TCATCACCGA CGCCATCTCC GGCATGGTGT CCAGCCTCGA TCCTCATTCC CAGTACTTCG ACAAGAAGTC CTTCAAGGAA TTCCGAGAGG GCACCACCGG CCGCTTCGTC GGCGTGGGCA TCGAGATCAC CCAGGAAGAC GGCCTGATCA AGATCGTCTC GCCCATCGAA GGCTCTCCGG CTTTCCGTGC GGGCCTGAAG ACCAACGACC TCATCACCAA GATCGACGAC ACGGCCGTGA AGGGGCTCGC CCTCAACGAA GCCGTGAAGA AGATGCGCGG CGAGCCCAAC ACCCAGGTCA CGCTCACCAT CTTCCGCAAG GACGAGAGCC GCACCTTCCC GGTCACCGTC ACGCGCGAGG AAATCAAGAC CCAGTCCGTG AAGGGCAAGG TGGTCGAGCC CGGCTATGCC TGGATCCGGC TGTCGCAGTT CCAGGAACGC ACGGTGGACG ATTTCGTGCG CAAGGTCGAG GAAATCTACC GCCAGGATCC GAACCTCAAG GGCATGGTGC TGGACCTGCG CAACGACCCC GGCGGCCTGC TCGACGCGGC CGTGGCCATC TCCACGGCCT TCCTGCCGGA GAACGTGACC GTCGTCTCCA CCAACGGCCA GCTCGCGGAA AGCAAGGCGG TCTACAAGGC CTCCCCCGAG TTCTACCAGC GCCGCGGCGC CGGCGACCCG CTCAAGCGGC TGCCCGCGGC GCTCAAGAAC GTTCCGCTGG TGGTGCTCGT GAACGAAGGC TCCGCCTCGG CCAGCGAGAT CGTGGCCGGA GCCCTGCAGG ACCACAAGCG CGCCACCATC ATGGGCAGCC AGACCTTCGG CAAGGGATCG GTGCAGACCG TCCGCCCGCT GGGTCCGGAC ACCGGCATCA AGCTCACCAC GGCGCGCTAC TACACGCCCA GCGGCAAATC CATCCAGGCC AAGGGCATCG TGCCCGACGT CATGGTGGAC GACAGCCCCG ACGGTGATCC CTTCGCCGCG CTGCGCATGC GCGAGGCGGA CCTCGAAAAG CACCTGACCA GCGGACAGGG CGAGGAGCAG AAGGACGCCG CCCGCGAAAA GGCCCGCGAA GAAGCCCGCA AGCGCCTGGA GGAAGAGGCG AAGAAGCCCG CCGCCGAGCG CAACAAGATG CCGGAGTTCG GAACCGACAA GGACTTCCAG CTCACCCAGG CCCTCAACCA GCTCAAGGGA CTGACCGTCG TCGTCAGCAA GACGCAGACG GAGCGCAAGG AAGAGAAGAA GGACAACTGA
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Protein sequence | MGHKLKIAGW VSVGVVAGAL TTVSLQTVAR GAMAPLPLEE IQQLSAVFGL VKTDYVEPVD DKKLITDAIS GMVSSLDPHS QYFDKKSFKE FREGTTGRFV GVGIEITQED GLIKIVSPIE GSPAFRAGLK TNDLITKIDD TAVKGLALNE AVKKMRGEPN TQVTLTIFRK DESRTFPVTV TREEIKTQSV KGKVVEPGYA WIRLSQFQER TVDDFVRKVE EIYRQDPNLK GMVLDLRNDP GGLLDAAVAI STAFLPENVT VVSTNGQLAE SKAVYKASPE FYQRRGAGDP LKRLPAALKN VPLVVLVNEG SASASEIVAG ALQDHKRATI MGSQTFGKGS VQTVRPLGPD TGIKLTTARY YTPSGKSIQA KGIVPDVMVD DSPDGDPFAA LRMREADLEK HLTSGQGEEQ KDAAREKARE EARKRLEEEA KKPAAERNKM PEFGTDKDFQ LTQALNQLKG LTVVVSKTQT ERKEEKKDN
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