| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3855 |
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| Symbol | |
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| ID | 4667314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 4282888 |
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| End bp | 4283346 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639825045 |
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| Product | preprotein translocase subunit SecB |
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| Protein accession | YP_972174 |
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| Protein GI | 120612496 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1952] Preprotein translocase subunit SecB |
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| TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.138411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCGAAG AAAATCCCGT GTTCCAGATC CAGCGCGTGT ATCTGAAGGA TCTGTCCCTG
GAGCAGCCGA ACTCGCCCCA GATCCTGCTG GAGCAGGAGC AGCCCAACGT GGACATCCAG
CTGGGCGTCG AGGCCGCGCC GGTCGCCGAC GGTATTTTCG AAGTGGCCGT GACGGCCACG
GTGCAGACCA AGATCAAGGA CAAGACGGTG TTCCTGGTCG AGGCCAAGCA GGCCGGCATC
TTCGAGATCC GCAACATTCC GGAAGACCAG ATGGGCCCGA TCATGGGCAT CGCCTGCCCG
CAGATCGTCT ATCCCTACCT GCGCGGCAAC ATCGCCGACG TGATCACGCG CGCCGGCTTC
CCGCCCGTGC ACCTGGCGGA GATCAACTTC CAGGCCATGT ACGAGCAGCA GCAGTCGCAG
CTGGCCTCGG CCGCGCCGAC GCCGGGCGTC ACGCAGTAA
|
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| Protein sequence | MSEENPVFQI QRVYLKDLSL EQPNSPQILL EQEQPNVDIQ LGVEAAPVAD GIFEVAVTAT
VQTKIKDKTV FLVEAKQAGI FEIRNIPEDQ MGPIMGIACP QIVYPYLRGN IADVITRAGF
PPVHLAEINF QAMYEQQQSQ LASAAPTPGV TQ
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