Gene Aave_3853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3853 
SymbolpanC 
ID4667368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4280646 
End bp4281494 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content71% 
IMG OID639825043 
Productpantoate--beta-alanine ligase 
Protein accessionYP_972172 
Protein GI120612494 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATCG CACACTCCAT CGCCGACCTG CGCTCCGCGC TCGCCAGCCG GGGCCGCCCG 
GCCTTCGTCC CCACCATGGG CAACCTGCAC GAAGGACACC TGTCCCTGGT GCGGCAGGCC
CGCACGCTCG GCGACGTCAC CGTCGCCAGC ATCTTCGTCA ACCGCCTGCA GTTCCTGCCC
CACGAGGATT TCGACAGCTA TCCCCGCACC TGGGAGGCCG ACCGCGCGCA ACTGGAGGTC
GCGGGCTGCG ACATCCTCTT CGCCCCGCGC GAGGCGGACC TCTACCCGCA GGCACAGACC
TTCAAGGTCC AGCCCGATCC GCTGCTGGCC GACCTGCTCG AAGGGCATTT CCGCCCCGGC
TTCTTCACGG GTGTCTGCAC CGTGGTCATG AAACTGTTCT CCGCCGTTTT CGGCACGACC
GGCGGCGGAA CGGCCCTTTT CGGCAAGAAG GACTACCAGC AGCTGATGGT GATCCGCCGC
ATGGTGGAGC AGTTCGCCCT GCCGGTGGAC ATCGTGGCGG GGGATACCTG CCGCGCCCCG
GACGGGCTCG CCCTCAGCTC GCGCAACGGC TACCTGGGGC CGGCCGAACG CACCAAGGCG
GTGGAGCTGG CGCGCGCCCT GCGGACCCTG TCGGATGCCG CACTCTCGCG CCCCGTCGCC
GACTGGCCCG GGCTGGAGGC CGCGGCGAGC GACGCGCTGC GCGGCCAGGG CTGGCAGCCC
GACTATCTCG TGGTGCGTCG CAGGGCCGAC CTGCAGCGCC CCGATACCGC ACCGCGGCCG
GGCACGCTGG TGGCCCTGGG CGCGGCCCGG CTGGGCTCGA CACGGCTCAT CGACAACTTC
GAATTCTGA
 
Protein sequence
MLIAHSIADL RSALASRGRP AFVPTMGNLH EGHLSLVRQA RTLGDVTVAS IFVNRLQFLP 
HEDFDSYPRT WEADRAQLEV AGCDILFAPR EADLYPQAQT FKVQPDPLLA DLLEGHFRPG
FFTGVCTVVM KLFSAVFGTT GGGTALFGKK DYQQLMVIRR MVEQFALPVD IVAGDTCRAP
DGLALSSRNG YLGPAERTKA VELARALRTL SDAALSRPVA DWPGLEAAAS DALRGQGWQP
DYLVVRRRAD LQRPDTAPRP GTLVALGAAR LGSTRLIDNF EF