Gene Aave_3812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3812 
Symbol 
ID4665954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4233642 
End bp4234853 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content67% 
IMG OID639825002 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_972131 
Protein GI120612453 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCATC TCAGTACCGA CCTCCCAATG CAAGCCTTGC GCCGGCGGCT CTCGGCGATC 
GGCATGCCGC TGGACGAATT GACGGCGGCT CTGCAGGAGC ATGCGGCGCA AGCCGATCGC
ACCGGCAAGA TTGCGCCCGC GTTCTGGGAG CGGGTGAATG TGCGCGGACT GAACCTCAAT
CTCGTGCCTC CGGACCATGG AGGGGACCCC GGCCTGTGGC CCCTGATGCA GCGCGTACTG
CTGATGGAAC AGCTCGGCTA CGCGGACCCG GCCCTGGCTC TGGCCATGCC CGGTCCAGGG
CTCGCCACGC CGCCGTTGCT GGCCCTGGCG TCCGAATCTC AGCAGCGGGC GCTCTTCGCA
CGCTTCCAGA AGGATCATCC CGTATGGGGC GGCTTCGCCA TCACGGAACC CGACATCGGC
TCGGATGCCA CCGCACTGCG CACCACGGCG CGGCCCGTGC GCGACGGCTA CCTGCTCAAC
GGAACCAAGT GCTTCATCAC CAATGGCGCC CGGGCGGACT TCGTGGTCAC CTTCGCAACC
CTGGACAAGG GGCGGGGACG CTTCGGCGTG CGCGCTTTCG CCGTCGATAG CACGGCGCCC
GGATTCGAGG TGGTGCGCCT GGAGAAGATG CTGGGGCTGC GCGCGAGCCA GCTCGCCGTG
CTCTCGTATT CGGATTGCCT GGTTCCACAC GACAGCCTGC TGCAGCGGGG AGACGAGGGG
CATATGCACG ATGCGTTTTC CGGGGCGCAG AGCTCCTGGG ACTTTTTCCG TCCAGTCCTC
TCGGCGACCA TTGTCGGCAG TTGCGCCCGG GCGCGGGACG AACTCGCGGC ATACCTGGCT
GCGCACCAGC CCGCCGCTCC AGGCTGGCGC AGGACCGATA CCGAGGATCT TCTGGCCGCC
GCAGGCGGAA AGATCGCCAT GGCCCGCCTG CTATGCCACA AGGCGGCGTG GCGGCACGAG
CAGGGACTTT CGGTATCCAA GGACTCTTCC ATGGCGAAAG CGTATGCATC GCGCATCGCC
ATGGAAATCG CCGAGGCGGT ACTCCAGGCG GTCGGGGCCC CGGGGCTGCA CGAACATCCC
GTGCTGGAGC GGTTCTACCG CAATGCCAAG GCCTACGACA TCCTCGAGGG TACCGGCGAC
ATGCAGCGGC TCATGGTGGC GCGATTGCAG CAGCGGCAAG CTGCCGCCGC GGACGAAACC
GCAGTCTTCT GA
 
Protein sequence
MIHLSTDLPM QALRRRLSAI GMPLDELTAA LQEHAAQADR TGKIAPAFWE RVNVRGLNLN 
LVPPDHGGDP GLWPLMQRVL LMEQLGYADP ALALAMPGPG LATPPLLALA SESQQRALFA
RFQKDHPVWG GFAITEPDIG SDATALRTTA RPVRDGYLLN GTKCFITNGA RADFVVTFAT
LDKGRGRFGV RAFAVDSTAP GFEVVRLEKM LGLRASQLAV LSYSDCLVPH DSLLQRGDEG
HMHDAFSGAQ SSWDFFRPVL SATIVGSCAR ARDELAAYLA AHQPAAPGWR RTDTEDLLAA
AGGKIAMARL LCHKAAWRHE QGLSVSKDSS MAKAYASRIA MEIAEAVLQA VGAPGLHEHP
VLERFYRNAK AYDILEGTGD MQRLMVARLQ QRQAAAADET AVF