| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3796 |
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| Symbol | |
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| ID | 4666921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 4218491 |
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| End bp | 4219759 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639824986 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_972115 |
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| Protein GI | 120612437 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.982597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGCA CATGGGTAAG CACCACGCCA ATACCTCTGC CGCACGTGAG CCGCACGCCC
TTCGACGCCA ACGGCCACCC CGAGGCAGCG GTGGACGCCC TGGGCCGGGA GACGCGCACC
GTGTTCGACC GCCGCGGCAA CCTGACGCTG CACCTGGATG CCGCCGGGCA CGCGACCCGC
ATCGAATACG GCACCGAAGG CGGCGCCCGG GACCGCCCCG TGCGCGTCAC CGATGCCCTG
GGCCACACGT GGACCCATGA ATACGATGCG CGCGGCAACC GCATCCGCTC CACCGATCCA
CTGGGCCGCA GCACCACCAC CCAGTACGAC GCCCGGGGCC TGCCGGTCGC CCTCACCGAT
GCCGCCGGCC GCACCCGCCG GCTGCAGTGG GACGCCTCCG CCCAGCTCAT CGCCTATACC
GACTGCTCGG GCCGCACCAG CCGCTACGCC TACGACGCCC TGGGCCACCT GGCCGAGAGC
GCCGATGCCT TGGGCCACAC CACCCGCTAC CGCCACGACG CGCAGGGCCG CCTGCGCGAA
GTGATCGAAC CCACGGGCGC CACCCACCGC TACGAATGGG ACGGCGAAGG CCAGTTGCTC
GCCTACACCG ACCCGCTCGG CGGCACCACG CGCTACCGCT ACCACGGCTC GGGCCAGCCG
TCCGAGCGCA CCGACGCGCG CGGCGGCGTG CTGCGCTACC ACTACGACCT GGGCGAACGG
CTCGTCGCAC TGACCAACGA GAACGGCGCG CACACCCGGT TCACCTACGA TGCGGCCGAC
CACCTCACCG ACGAGATCGG CTTCGATGGC CGCCACCAGC GCTACGTGTA CAACGCCGCG
GGCGAACTGA CCCACGTCGT CGAGGCCGGA GGCAGCGACG CCGGCCCGGG CAAGGTCACG
CACCTGGAGC GCGATGCGCT GGGCCGGTTC CCCCCGCGTC AGAATAGTTG TCGCCTCGAT
AGGACTCCGG TGTTCGGAGT TCATGAAGGT AGTAGGAGGC TGTGTAGTTG TGGTCGAAGG
TCTGCGTGGT GGGCAACGCG AAGCGTTGTC CACGGCAAGC GGGCCGGTGC GCGCAGCGCA
TCGTCCACAA ATGCACAGCC TTGCAGGTGC CTTCAGGCGC CGGCCCGCTG CCGTGTGTTT
CACCCCGGGG GCGAAGAGCG AGAAGCCAGT TGGCACGATA CGGACAAGCA TTCAAAGACA
GAGCGGTGGG CAGGTTGCTG CCACCGCACA GCGCCACGCC CGACGAGCTG GCGCGTGAGA
TCGGCGTGA
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| Protein sequence | MMRTWVSTTP IPLPHVSRTP FDANGHPEAA VDALGRETRT VFDRRGNLTL HLDAAGHATR
IEYGTEGGAR DRPVRVTDAL GHTWTHEYDA RGNRIRSTDP LGRSTTTQYD ARGLPVALTD
AAGRTRRLQW DASAQLIAYT DCSGRTSRYA YDALGHLAES ADALGHTTRY RHDAQGRLRE
VIEPTGATHR YEWDGEGQLL AYTDPLGGTT RYRYHGSGQP SERTDARGGV LRYHYDLGER
LVALTNENGA HTRFTYDAAD HLTDEIGFDG RHQRYVYNAA GELTHVVEAG GSDAGPGKVT
HLERDALGRF PPRQNSCRLD RTPVFGVHEG SRRLCSCGRR SAWWATRSVV HGKRAGARSA
SSTNAQPCRC LQAPARCRVF HPGGEEREAS WHDTDKHSKT ERWAGCCHRT APRPTSWRVR
SA
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