Gene Aave_3794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3794 
Symbol 
ID4666884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4217094 
End bp4218167 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content51% 
IMG OID639824984 
ProductRhs family protein 
Protein accessionYP_972113 
Protein GI120612435 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3209] Rhs family protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.279283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGCG CGCACCGGCC CGCTTGCCGT GGACAACGCT TCGCGTTGCC CACCACGCAG 
ACCTTCGACC ACAACTACAC AGCCTCCTAC TACCTTCATG AACTCCGAAC ACCGGAGTCC
TATCGAGGCG ACAACTATTC TGACGCGGGG GGCCAGCGCG GGGGCAAAGC CAGCCTGTTC
ATCTACGAGC CGGGCAGCTT CGTGCCTTTG GCCACCGTGC AGGGCACGCA GCAGCCAGGC
GACAGCCGCA TCTACTGGTA CCAGTGCGAC CAGATCGGGG CTCCGCTGGA GTTGACTGAT
GCACAGGGGC ACGTTGCCTG GGCTGCGGAT TACAAGGTGT GGGGCGAGGC CGCCCTAAGG
AAGGTGCTTA AATCGGCTAC AGGTACTGAT GCCTTGCCCG GGCCACGACA CAAAGGCCAT
GGACCTGTGC TGGATGAGCA CGATGCTTAT AAAAATCAGT TGAGCCATAG CGTATCGCCT
TTTTTAGAAC AACCTTTTCG ATTTCAAGGG CAGCAATTCG ATGCAGAAAC GGGGCTCCAC
TACAACCGAT TCAGGTATTA TGATCCGAGT ATAGGCAGAT TTTTCAGCCA AGATCCAGTA
GGCTTACACG GGGGAATTCA TGGCTTCGCA TACGCGCCTA ATCCCAATAA TTGGATAGAT
CCGCTTGGCT TAAGCAATAA ATGCTATAAC TGCCTACCCA AGTGCACAGA TATTAACGCT
CCTCACAAGC CTAAAACTGC AGAAGAAATG GCTGCAGAAC TTTCCAACCA AATTAACAAA
AATTCTGTTA CCTTTAGCAC TCCAACGAAG CAGGGACACA TAGACCTGCA GGGTAGGACT
CACTATGACA AAGCAACAGA GACCCACATC CCAACACCAC ACATTCAAAC ACGAGATATT
AATATTGGAC CCAATGAAAG AATAACTACT TCAAAAAAAC CGAAGTTACC ACTGCAGCAA
CAAAGCAAGA TGTCAGAACG GCTCGCCGGC TTGCCAAAGA GAAAGGTTTA TGCAGATGAA
TGCACCAGAA GCTCTAAAAA AACTTACAAA ATGGAACAAC GAAAAATACA ATGA
 
Protein sequence
MRCAHRPACR GQRFALPTTQ TFDHNYTASY YLHELRTPES YRGDNYSDAG GQRGGKASLF 
IYEPGSFVPL ATVQGTQQPG DSRIYWYQCD QIGAPLELTD AQGHVAWAAD YKVWGEAALR
KVLKSATGTD ALPGPRHKGH GPVLDEHDAY KNQLSHSVSP FLEQPFRFQG QQFDAETGLH
YNRFRYYDPS IGRFFSQDPV GLHGGIHGFA YAPNPNNWID PLGLSNKCYN CLPKCTDINA
PHKPKTAEEM AAELSNQINK NSVTFSTPTK QGHIDLQGRT HYDKATETHI PTPHIQTRDI
NIGPNERITT SKKPKLPLQQ QSKMSERLAG LPKRKVYADE CTRSSKKTYK MEQRKIQ