| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3770 |
|---|
| Symbol | |
|---|
| ID | 4668427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | - |
|---|
| Start bp | 4190228 |
|---|
| End bp | 4191553 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639824962 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_972091 |
|---|
| Protein GI | 120612413 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAG CAATACTTTT CGCCCTCATC CTTCTCAATG GCCTTTTTGC CATGTCCGAG
CTGGCGCTGG TTTCCGCGCG CAAGACCCGG TTGCAGAAGC TGATCGATGA GGGCGATACC
GGCGCCATCG CCGCCATGAA GCTCGGCGAA GACCCTACGC GCTTTCTCTC CACCATCCAG
ATCGGCATCA CCTCGATCGG CGTGCTCAAC GGCATTGTCG GCGAGGCCGC ACTCGCCGCG
CCGCTGGGCG AGTGGCTGCT GTCGTTGGGC ATGCCCGAGA AGGCCGCCGG CTACACGGCG
ACGGGCCTGG TGGTGGTCTT CATCACCTAT TTCTCCATCG TCGTGGGCGA ACTGGTGCCC
AAGCGCCTGG GCCAGAGCTA TCCCGAGACG CTGGCGCGCC TGGTGGCCCG CCCCATCAAC
TGGCTGGCGC TCGCCACCAA GCCGTTCGTG CGGCTGCTGT CGGTGTCCAC CCAGGCCCTG
CTGCGGCTGC TGGGCGTGAA GGAGAACACC GCCAGCGCCG TGACCGAGGC CGAGATCCAT
GCCGTGCTGG CCGAGGGCAC GAGCGCGGGC GTGATCGAAT CCCACGAGCA CCAGATGGTG
CGCAACGTGT TCCGCCTGGA CGACCGCCAG ATCGGCTCCC TCATGGTGCC GCGCGCCGAC
GTGGTGGTGC TCGACGTGGA GGATTCCTTC GAGGAGAACC TGCAGCGCGT CGAGGCCTCC
GACCACGGCC GCTTCCCGGT GGTGCGCGGC GGCATGGAGA ACGTGCTGGG CGTGCTCAAC
GCCCGCCAGT GGCTGTCGCG CTCGCTGCGC GAGGACGTGC GCGACCTGGC CACCCAGCCG
CTGCAGTCGG CCCTGTACGT GCCCGAGACC ATCACCGGCA TGGAGCTGCT CGACAACTTC
CGCCAGTCCG ACCTGCAGAT GGCCTTCGTG ATCGACGAAT ACGGCGAGGT GCAGGGCATC
GTCACGCTGC GCGACCTCAT CGAGGCGATC ACCGGCGAAT TCCACGCGCG CGATCCGGAA
ACCTCCTGGG CCGTGCAGCG CGAGGACGGC AGCTGGCTGC TCGACGGCCA CATTCCCGTG
CCGGAACTCA AGGACCGCCT GGGCCTGGAC ACCGTGCCCG AGGAAGAGCG CGGCCGCTAC
CACACGCTCA GCGGCATGGT GATGCTGCTG ACCGGCAAGC TGCCCAAGGT GACCGACACC
GTGCAGTGGG AGGAGTGGCA GTTCGAGGTG GTGGACATGG ACGGCAAGAC CATCGACAAG
GTGCTCGCCA GCCCGCTGCC CTCGGTCGAG ATCGCGCAGC CGCAGGGCGC GGCGATGGCC
GACTGA
|
|---|
| Protein sequence | MEIAILFALI LLNGLFAMSE LALVSARKTR LQKLIDEGDT GAIAAMKLGE DPTRFLSTIQ
IGITSIGVLN GIVGEAALAA PLGEWLLSLG MPEKAAGYTA TGLVVVFITY FSIVVGELVP
KRLGQSYPET LARLVARPIN WLALATKPFV RLLSVSTQAL LRLLGVKENT ASAVTEAEIH
AVLAEGTSAG VIESHEHQMV RNVFRLDDRQ IGSLMVPRAD VVVLDVEDSF EENLQRVEAS
DHGRFPVVRG GMENVLGVLN ARQWLSRSLR EDVRDLATQP LQSALYVPET ITGMELLDNF
RQSDLQMAFV IDEYGEVQGI VTLRDLIEAI TGEFHARDPE TSWAVQREDG SWLLDGHIPV
PELKDRLGLD TVPEEERGRY HTLSGMVMLL TGKLPKVTDT VQWEEWQFEV VDMDGKTIDK
VLASPLPSVE IAQPQGAAMA D
|
|---|
| |