Gene Aave_3758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3758 
Symbol 
ID4668979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4174607 
End bp4175533 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content68% 
IMG OID639824949 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_972079 
Protein GI120612401 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTCC TCTACCGTCC CGACGTCTCC CGTGGCCCCG CATGGCGCAA GCTGTTCGCC 
GAGCAGGCAC CCGACATCGA TTTCAGAGTG TGGCCCGACG CGGGCAACCT CGACGAGATC
GAATACCTGA TCGCCTGGCA GGCTCCCGCC GCGTTCCTCG CTTCCCTGTC CAACCTCAAG
GTGCTTTTCT CTTCCGGCGC GGGCGTGGAC CACATCGACC TGACCGCCGT ACCTGCGCAT
GTCGATATCG TGCGGATGGT GGAGCCCGGC ATCATCAACG GCATGGTCGA GTATGTGACG
ATGGCGGTGC TCGCACAGCA CCGCCACCTC TTCGACTACC AGGCGTCGCA GCGCGCGAGG
CGCTGGGAGC CCCTCGAAGA GCTTCCGCCG TCCACCTGCT CCGTCGGCGT CATGGGCCTG
GGGGTGCTGG GACAGGCGGT TCTCGACCGC CTCGGCCTGT TCGGGTTCGA GCGATCGGGC
TGGAACCGAT CGCCCAGGGA CCTTCCGGGG GTTCGGTGCT TCGCGGGCAC CGATTCGCTC
GGCGAATTCC TGGGACAGGT GGATGTGCTG GTCTGCCTGC TTCCGCTCAC CGATGCCACG
CGGCACATCC TCGATGCCCG CCTTTTCGCG CGCATGCGTG ACGGCAGTGC GCTGGTCAAT
GTGGGCCGCG GAGGCCACCT GGACCAGCAG GCGCTCCTGC AGGCGCTCGA CAGCGGGCGC
CTGAGCCGGG CGATCCTGGA CGTCACCGAT CCGGAGCCGC TGCCCGCCGA GAGTCCCCTG
TGGTCCCATC CCCGCGTCGT GCTCACCCCG CATATCGCGA GCATGACGCA GCCGGAAACG
GCCGTGCCGA TCCTGATCCG GAACCTGCGC CGCCATGGCA GGGGGCAGCC ACTGCCCGAT
CTGATCGATC GCCGCGCCGG CTACTGA
 
Protein sequence
MAVLYRPDVS RGPAWRKLFA EQAPDIDFRV WPDAGNLDEI EYLIAWQAPA AFLASLSNLK 
VLFSSGAGVD HIDLTAVPAH VDIVRMVEPG IINGMVEYVT MAVLAQHRHL FDYQASQRAR
RWEPLEELPP STCSVGVMGL GVLGQAVLDR LGLFGFERSG WNRSPRDLPG VRCFAGTDSL
GEFLGQVDVL VCLLPLTDAT RHILDARLFA RMRDGSALVN VGRGGHLDQQ ALLQALDSGR
LSRAILDVTD PEPLPAESPL WSHPRVVLTP HIASMTQPET AVPILIRNLR RHGRGQPLPD
LIDRRAGY