Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3739 |
Symbol | |
ID | 4669203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4147715 |
End bp | 4149547 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639824930 |
Product | putative DnaK-related protein (molecular chaperone) |
Protein accession | YP_972060 |
Protein GI | 120612382 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.676013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.253359 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCCAAC CGAAATACGC CATCGGCATC GACCTCGGCA CCACGCACAG CGCGCTCTCC TGGGTCGATC TGCACACCGA GGGCGCGGCG CCCGAGATCC TGCCCGTCGC CCAGCAGAGC GGCCCCGGCG CCGTGCAGGA CTATTCCCTG CTGCCCTCCT TCCTCTACGT GCCGCACGAC AGCGAATTCG CGCCCGGCGA CCTGGCCCTG CCCTGGAACG CCGCGCCCGG CCGCATCACC GGCGAATGGG CGCGCAGCCA CGGCGCGCTC ACGCCGATCC GCCTCGTCTC CAGCGCCAAG AGCTGGCTCG GCCATGCCGG CGTGGACCGC CGCGCCGGCA TCCTGCCGGC CGACGCGCCG CCCGAGGTCG AGCGCATCTC GCCGCTGGCC GCCAGCACCC ACTACCTGCA GCACCTGCGC GACGCCTGGA ACCACCGCCA CCCGGAGGCG CCGTTCGACC AGCAGTCCGT CACCGTCACC ATCCCCGCAT CGTTCGACCC GGCCGCGCGC GAACTCACGG CCGAGGCCGC CCAGGCCGCC GGCTACCACG GCATCACCCT GCTGGAAGAG CCCCAGGCCG CGCTCTACAG CTGGATCGCG GGCAGCGCGG GCGACTGGCG CAAGCAGGTG CAGGTGGGCG ACGTGATCCT CGTCGTCGAT GTGGGGGGCG GCACCAGCGA CTTCTCGCTC ATCGCCGTCA CCGAAGACGC CGGCAACCTG CAGCTCAACC GCGTGGCCGT GGGCGAGCAC ATCCTGCTCG GCGGCGACAA CATGGACCTG GCCCTCGCCC ACGGCGTCGC GCGCGGCCTG GCCGCCGAAG GCAAACAGCT CGACCCCTGG CAGATGCGCG CGCTCACCTA CGCCTGCCGC CTGGCCAAGG AGCAGTTGCT GAGCGACCCC GGCCTGCAGA GCGTGCCCCT GGTCGTGCCC AGCCGCGGCT CCAAGCTCAT CGGCGGCTCC ATCCGCACCG AACTGCAGCG CGAACTGCTC TCCACCATCC TGCTCGAAGG CTTCTTCCCG GCCGTCGAGA GCAGCGCCCG GCCCATCACC CGCCCGCGCG CCGGCCTCAC GCAGATCGGC CTGCCCTACG CGCAGGATGC CGCCGTCACC CGCCACCTGG CCGCGCTGCT GGGCCGCCAA GTGGGGGCCA CCGCGCAGCT GCCGGGCTTC GCCCAGCCCG AGGGCGCGAC CTTCCTGCAC CCCACGGCCG TGCTGTTCAA CGGCGGCGTG TTCAAGTCCG AACTGCTGGC CGAACGCGTG CTCTCCACGC TCAACGCCTG GCTCGCCGCC GACGGCGCGC CCCCCGCCCG CCTGCTGCAG GGCGCCGACA TGGACCATGC CGTGGCGCGC GGCGCCGCCT ACTACGGCCA GGTGCGCCAG GGCCGCGGCA TCCGCATCCG CGGTGGCACG GCCCAGGCCT ACTACGTCGG CATCGAATCC AGCATGCCCG CCGTGCCCGG CCTGGAGCCG CCCGTGCAGG CCCTGTGCGT CGCGCCCTTC GGCATGGAAG AAGGCTCCGA GGCACCGCTG CCTCCGCAGC AACTGGGCCT CGTGGTCGGT GAATCCGTGC GCTTCCGCTT CTTCGGATCG TCCGTGCGGC GCGACGACCA GCCCGGCACC CTGCTGGATT TTTGGTCGCC CGAAGAACTG CAGGAACTCG CGCAGATCGA AGCCACGCTG CCCGCCGAAG GCCGCGCCGC GGGCGAGGTC GTGCCCGTGC AACTGCGCGC GCGCGTGACC GACATCGGCA CGCTGGAACT GCTGGCACAA GCAAGTGTCG GGGCCTCGGG CGGCGCGCAG TGGAAGGTGG AGTTCGACGT CCGCGACGCG TGA
|
Protein sequence | MSQPKYAIGI DLGTTHSALS WVDLHTEGAA PEILPVAQQS GPGAVQDYSL LPSFLYVPHD SEFAPGDLAL PWNAAPGRIT GEWARSHGAL TPIRLVSSAK SWLGHAGVDR RAGILPADAP PEVERISPLA ASTHYLQHLR DAWNHRHPEA PFDQQSVTVT IPASFDPAAR ELTAEAAQAA GYHGITLLEE PQAALYSWIA GSAGDWRKQV QVGDVILVVD VGGGTSDFSL IAVTEDAGNL QLNRVAVGEH ILLGGDNMDL ALAHGVARGL AAEGKQLDPW QMRALTYACR LAKEQLLSDP GLQSVPLVVP SRGSKLIGGS IRTELQRELL STILLEGFFP AVESSARPIT RPRAGLTQIG LPYAQDAAVT RHLAALLGRQ VGATAQLPGF AQPEGATFLH PTAVLFNGGV FKSELLAERV LSTLNAWLAA DGAPPARLLQ GADMDHAVAR GAAYYGQVRQ GRGIRIRGGT AQAYYVGIES SMPAVPGLEP PVQALCVAPF GMEEGSEAPL PPQQLGLVVG ESVRFRFFGS SVRRDDQPGT LLDFWSPEEL QELAQIEATL PAEGRAAGEV VPVQLRARVT DIGTLELLAQ ASVGASGGAQ WKVEFDVRDA
|
| |