Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3728 |
Symbol | |
ID | 4669495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4115994 |
End bp | 4118195 |
Gene Length | 2202 bp |
Protein Length | 733 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639824919 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_972049 |
Protein GI | 120612371 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0317837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.454435 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCATG TTTCCGCCGC GAGGCCTGCG CGGCAGCGCC TGCTGCACGC TTCCATCACC GCGGCCTTCG GCACCGCGGC CGTGCTGTCC ACCCCGCTGG CGGGGGCACA GGACGCCTCC GCCGGCTCCA CCACGCTGCC CACGGTCACG GTGACCGGCG GCGCCGAGGA GAGCGCCACG GGCCGGGTGA ACGGCTACAC GGCACGCCGC AGCGCGACCG CCACCAAGAC GGACACCCCC CTGATCGAGA CGCCGCAGTC CATTTCGGTG ATCCCGGCGG ACCTGATGGA GGCGCAGGGC GCGCGCACGG TGAAGGACGC GCTCAGCTAC TCGCCGGGCG TGATCCCGAC GCGCTTCGGC GCGGACTCGC GCTACGACTG GATCTCGCTG CGCGGCTTCG ATGCCTATTC GCCGGGCTTC TACCTGGACG GCATGCCGCT GCGCAACAAC GGCAACTGGG GCATCTGGCC CGTGGAGAGC TATGGGGCCG AGCGGATCGA ACTGCTGCGC GGGCCGGCGT CGGTGCTGTA CGGCATGAGC GGCCCGGGCG GGCTGGTGAA CGCCGTGAGC AAGCGCCCGA CGGCCGAGCC GCTGCGCGAG GTGCAGGTGC AGATCGGCGA CCACGGGCGC CGCCAGATCG CGGCCGACGT GTCCGGCCCG CTGCGCGAGG ATGGCAAGCT GCTCTACCGC CTGACCGCGC TCACGCGCGA TGCCGAGCTG CCGGCGGGCG ACATGAAGGA CGACCGCACC TTCATCGCCC CGGCCTTCAC CTGGAAGCCC TCCGGCGACA CCAGCCTGAC CGTGCTGTCG CAGTTCGGCC GCACCCGCGC CGGGGTGTAC TCGCGCACGC GGCCGGCCGT GGGCTCGCTG GTGCCGACGG CCATCGGCAC CACCATCCCG AGCGACCTGT TCGCCGGGGA GCCGGGCTAC AACCGCTTCG ACATGGACAC CGCGATGATC GGCTACCTGT TCGAGCACCG CATCGATGAT GCCTTCACCG TGCGGCAGAA CGCGCGCTAC GGCCGCCTCG AGGTGGACTA CACCGCGGTG CAGGGACGCA ACTTCATCAC CGTGAACCCG GCGAACCCGC GCGATCCGGC GAATTTCTCC ACGCTGCGGC GCACGGTGTC GGGCAGCAAC GAGCGCATCC ACGCGCTGAA CCTCGACAAC CAGCTGGAAG CGCGCCTGCG CTCGGGCGAC GTGCAGCACA CCGTGCTGGC CGGGCTGGAA TACCAGCGCA CCCGCATCGA CCAGGTCAGC TACAGCGGCG GCTCCGCGAG CCCGCTCGAC ATCTACAACC CCGTGTATGG CGGCGCGGTG CAGCTGCCCG CGCCGTGGTA CGACGGCGTC GCCACGCTCG CGCAGACCGG CTTCTATCTG CAGGACCAGA TCAAGTGGCG CGACCGCTGG GTGCTCACGC TGGGCGCGCG CTACGACCGC GCCACCAGCG ATGCGGACAG CCGGCTGGAC GGCAGCCGGA CCAGGGTGTC GGAACACAAG GCGACGAAGC GCGCGGGCCT GACCTACCTG GCCGAGAGCG GCTGGGCGCC GTACGTGAGC TATACCGAAT CGTTCGTGCC CACGGCCATG CGCAACCCGG CCACGGGCCA GCCGTTCAAG CCCGAGACCG GCCGCCAGTA CGAAGCCGGC GTGCGCTACC AGCCCGAGGG CGGCAGGCAG CGCTACAGCG CCGCCATCTT CGACCTGCGC CGCAAGAACT ACCTGACCGC GGACGACAAT TTCGTGCCGC GCCAGACCGG CGAGATCCAG GTGCGCGGCC TGGAGCTGGA AGCCTCGGCC GAGCTGATGC CGCGCCTGAA CGTGGTGGGC TCCTACACCT ACACGCCCAC GGCGAAGATC ACGGCCAGCA GCACGGCGCG CGAGATCGGC AAGCCGCTCA CGGCGGTGTC GCGCAACGCC GCGGCGCTGT GGGTGGACTA CCGGTTCGCG AACCGCATCA AGGTGGGCCT GGGCGCGCGC TACACCGGAT CCAACCATGG CGACCTGGAC GCGGCGCCGG CGAAGGTGCC GTCCTTCACC GTGTTCGACG CGATGATCGG CTACGACATC GACCGCTGGA GCTTCGCGCT GAACGTGCGC AACCTGGGCG ACAAGACGTA TATCGGCAAC TGCGACCAGT ACGGCAACTG CTACTACGGC GATCCGCGCC GGGTGGTGGC GACGGCCACG TACCGCTGGT AA
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Protein sequence | MRHVSAARPA RQRLLHASIT AAFGTAAVLS TPLAGAQDAS AGSTTLPTVT VTGGAEESAT GRVNGYTARR SATATKTDTP LIETPQSISV IPADLMEAQG ARTVKDALSY SPGVIPTRFG ADSRYDWISL RGFDAYSPGF YLDGMPLRNN GNWGIWPVES YGAERIELLR GPASVLYGMS GPGGLVNAVS KRPTAEPLRE VQVQIGDHGR RQIAADVSGP LREDGKLLYR LTALTRDAEL PAGDMKDDRT FIAPAFTWKP SGDTSLTVLS QFGRTRAGVY SRTRPAVGSL VPTAIGTTIP SDLFAGEPGY NRFDMDTAMI GYLFEHRIDD AFTVRQNARY GRLEVDYTAV QGRNFITVNP ANPRDPANFS TLRRTVSGSN ERIHALNLDN QLEARLRSGD VQHTVLAGLE YQRTRIDQVS YSGGSASPLD IYNPVYGGAV QLPAPWYDGV ATLAQTGFYL QDQIKWRDRW VLTLGARYDR ATSDADSRLD GSRTRVSEHK ATKRAGLTYL AESGWAPYVS YTESFVPTAM RNPATGQPFK PETGRQYEAG VRYQPEGGRQ RYSAAIFDLR RKNYLTADDN FVPRQTGEIQ VRGLELEASA ELMPRLNVVG SYTYTPTAKI TASSTAREIG KPLTAVSRNA AALWVDYRFA NRIKVGLGAR YTGSNHGDLD AAPAKVPSFT VFDAMIGYDI DRWSFALNVR NLGDKTYIGN CDQYGNCYYG DPRRVVATAT YRW
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