| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3727 |
|---|
| Symbol | |
|---|
| ID | 4668696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 4114782 |
|---|
| End bp | 4115882 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639824918 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_972048 |
|---|
| Protein GI | 120612370 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.752292 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.168128 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAATTCG CCACGCCCCA TACCCCGACT TCTTCCCCTT CCTCCGCTGC TGCGGACACC
CAGGCCGCCG CCGGCCGGCC TTTCCTGTCC TCTTTCCTGT CCTATGCAGG CGGGCAGGCG
CATGCGGTGC GCATCGACGG CGCCTCCCTG CAGGTGGAGG GCGGGCCGGC GGAGACGGCA
TCGCACTGGA CGCTGTCCGG GCACGGCGGC GACCTCGTGC TCCGGCCCGC TACGGAGGGT
GCCCGGCCGG CGCCGGCAGC GCACGGGCTC GCGGCGCTGG ACGCCGCCTT TGCCGCGCAC
CCGGAATGCA GGGACCTGGC CATGCATCCT GCCGACCCCC AGGCCCTGGC CGCGCTGGCG
GAGGCGGGCG TGGTGCTACC GGCGGCGGAC GGCATCTGGC GCGCCTGCCG GGACACGCTG
TGGCAGCAGC CCGGGCTCTG GCGGCCCGGG GTGCCGCCGC CGATGGCGCA GCGCTTCGCG
CTGACGGAGG GCCGCTACCA CCCTCGCCGC GCGCCGAAGC CGCACGGGCT GCTCTACCAG
CGCTATATCC CGTGGCTCGG GCGCACGTTC ACCTTCCGCA GCCTGGAGAT CGACGAAGAC
CTGCCGCGCT TCAACCGCTG GATGAACGAC CCCGACGTGG CGGTGATCTG GGAAGAAGAA
GGCGACCTGC AGAAGCACCG CGCCTACCTG GAGGGGATAG CCCGCGATCC GCACATGCAT
TCGATGATCG CCAGCCTGGA TGGCGAGCCG TTCGCGTATT TCGAGGCGTA CTGGACCAAG
GAGAGCCGCA TCGCGCCCTT CTACGACGCG CACGACTACG ACCGCGGCTG GCATGTGCTG
GTCGGGGAGC CGGCGTTCCG GGGCAAGGCC TTCGCCACCG CCTGGCTCAC CTCGATCTCG
CACTACCTGT TCCTGTGCGA TGCGCGCACG CAGCGCATCC TGGGCGAGCC GCGCATCGAC
CACCATCAGC AGATCCGCAA CCTCGACAAG TCCGGCTACG CGAAGGTCAA GGAGTTCGAC
CTGCCGCACA AGCGCGCGCA ACTGGTGATG CTGCTGCGCG AGCACTACTT CTACGACGGG
CTGTGGATGC CGCGGACCTG A
|
|---|
| Protein sequence | MKFATPHTPT SSPSSAAADT QAAAGRPFLS SFLSYAGGQA HAVRIDGASL QVEGGPAETA
SHWTLSGHGG DLVLRPATEG ARPAPAAHGL AALDAAFAAH PECRDLAMHP ADPQALAALA
EAGVVLPAAD GIWRACRDTL WQQPGLWRPG VPPPMAQRFA LTEGRYHPRR APKPHGLLYQ
RYIPWLGRTF TFRSLEIDED LPRFNRWMND PDVAVIWEEE GDLQKHRAYL EGIARDPHMH
SMIASLDGEP FAYFEAYWTK ESRIAPFYDA HDYDRGWHVL VGEPAFRGKA FATAWLTSIS
HYLFLCDART QRILGEPRID HHQQIRNLDK SGYAKVKEFD LPHKRAQLVM LLREHYFYDG
LWMPRT
|
|---|
| |