| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3702 |
|---|
| Symbol | |
|---|
| ID | 4667217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 4078896 |
|---|
| End bp | 4080611 |
|---|
| Gene Length | 1716 bp |
|---|
| Protein Length | 571 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639824894 |
|---|
| Product | single-stranded-DNA-specific exonuclease RecJ |
|---|
| Protein accession | YP_972024 |
|---|
| Protein GI | 120612346 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
|---|
| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.713364 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCG TGGCCCGGGA CATTCCGCCC CGCGCCGTGT GGGCGCTGGA GCAGGCGGGC
GTGCATCCGC TGCTCGCGCG GCTGTACGCG GCGCGCGGCG TGACCGCCCA CGACGAGCTC
GACGACGCGC TGGCGCGGCT GCTGCCGCCG CCCGGTCTGC GGGGCACGCG CGAGGCCGCG
GCGCTGCTGG CCGATGCGAT CGCGCAGGAC CGGCGCATCG TCGTGGTGGC CGATTACGAC
TGCGACGGGG CCACCGCGTG CGCCGTGGCG GTGCGCGGCC TGCGGCTGCT GGGCGCGCGC
CAGGTGGACT ACCTGGTGCC CGACCGCATC GCCGACGGCT ACGGCCTGAG CCCGGCCATC
GCGCGCCGCG TGCGCGAACG CGGGGCCGAC CTGCTGGTCA CGGTGGACAA CGGCATCGCC
AGCGTGGAGG GCGTGGCCGA GGCCAAGGCG CTGGGCCTCT CGGTGCTGGT CACGGACCAC
CACCTGCCCG GCCCGGAACT GCCGCAGGCC GATGCCATCG TGAACCCCAA CCAGCCGGGC
TGCAGCTTCG AGAGCAAGTC CATCGCCGGC GTGGGCGTGA TGTTCTACGT GCTGATGGCG
CTGCGCGCGG AACTGCGCGA ACGCGGCGTG TTCGACAAGG CCAGCCAGCC GAAGCTGGAG
CCGCTGCTGC CCCTGGTCGC GCTGGGCACG GTGGCCGACG TGGTGCGGCT GGACGCGAAC
AACCGGCGCC TGGTGGCGCA GGGGCTCAAG CGCATCCGCG CGGGCCACAT GCCGGCGGGT
ATCGCGGCGC TGTTCGACGC GGCGGGCCGC AAGGCGGCCG TGGCGACGAC CTTCGATTTC
GGGTTTGCGC TGGGCCCGCG CATCAACGCG GCCGGGCGCC TCGCGGACAT GACGCTGGGC
ATCGAATGCC TGCTGACCGA CGACCCGGGC CGGGCCGCGG AACTGGCGCG CACGCTCGAC
GCGATCAACC GCGAGCGGCG CGAGATCGAA GGCGGCATGC GCGAGCAGGC CCTCCTGATG
GCCGAGAGCC TGTTCGGCGA GAACGACGAG CCGCCGGCCG CGGTGAGCGT GTGGGACCCG
GACTTCCACG AGGGCGTGGT CGGCATCGTG GCCTCGCGCA TCAAGGACCG GCTGCACCGG
CCGACCTTCG TGTTCGCCAC CAGCAGCGCG CCGGGCAAGG AGGACGAGAT CAAGGGCTCG
GGCCGCTCCA TTCCGGGCTT CCACCTGCGC GATGCGCTCG ACCTGGTGGC CAAGCGCCAT
CCGGGCGTGA TCCTGAAGTT CGGCGGCCAT GCGATGGCCG CCGGCTGCAC GGTGGCCAAG
GACCGGTTCC CGGTGTTCGA GCGCGCGTTC GCCCAGGTGG CCCAGGAGTG GCTGGATGCC
GCGACCCTGA TGCGCCGGCT CGACACCGAC GGGCCGCTCT CGCCGGAATA CTGCCGCGCC
GAACTCGTGG ACACCCTGCA CCGCGAGGTC TGGGGCCAGG GCTTCGCGCC GCCGACCTTC
AGCGAGGAGG TGGAAATCAT CAGCCAGCGC CTCGTGGGCG AAGGGAAGAA CCACCTGTCG
CTCAAGCTGC TGCACCAGGG CCGCCCCGTG GACGGCATCT GGTTCGGCCA CACGGAGCCG
CTGCCGGCGC GCGTGCTGCT GGCGTTCCGG CTCGACGTGA ACGAGTGGAA GGGCGAGCGG
CGGGTGCAGT TCCTGGTGGA AGGCGCGCAG CTCTAG
|
|---|
| Protein sequence | MKIVARDIPP RAVWALEQAG VHPLLARLYA ARGVTAHDEL DDALARLLPP PGLRGTREAA
ALLADAIAQD RRIVVVADYD CDGATACAVA VRGLRLLGAR QVDYLVPDRI ADGYGLSPAI
ARRVRERGAD LLVTVDNGIA SVEGVAEAKA LGLSVLVTDH HLPGPELPQA DAIVNPNQPG
CSFESKSIAG VGVMFYVLMA LRAELRERGV FDKASQPKLE PLLPLVALGT VADVVRLDAN
NRRLVAQGLK RIRAGHMPAG IAALFDAAGR KAAVATTFDF GFALGPRINA AGRLADMTLG
IECLLTDDPG RAAELARTLD AINRERREIE GGMREQALLM AESLFGENDE PPAAVSVWDP
DFHEGVVGIV ASRIKDRLHR PTFVFATSSA PGKEDEIKGS GRSIPGFHLR DALDLVAKRH
PGVILKFGGH AMAAGCTVAK DRFPVFERAF AQVAQEWLDA ATLMRRLDTD GPLSPEYCRA
ELVDTLHREV WGQGFAPPTF SEEVEIISQR LVGEGKNHLS LKLLHQGRPV DGIWFGHTEP
LPARVLLAFR LDVNEWKGER RVQFLVEGAQ L
|
|---|
| |