Gene Aave_3697 details

Gene Information

• Locus tag: Aave_3697
• Symbol: mscL
• ID: 4666374
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax citrulli AAC00-1
• Kingdom: Bacteria
• Replicon accession: NC_008752
• Strand: +
• Start bp: 4074172
• End bp: 4074603
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 639824889
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_972019
• Protein GI: 120612341
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.93238
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 0.982216
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGTATTG CGAAGGAGTT CCGGGAGTTC GCGGTGAAGG GAAATGTGAT AGATCTCGCC 
GTAGGCGTGA TCATCGGCGG CGCGTTCGGG AAGATCGTGG ACTCGCTCGT GAACGACGTC 
ATCATGCCCA TCGTCGGGCT GGTATTCGGC AGGCTGGATT TCTCGAATCT CTTTCTCGTG 
CTCGGCAGTG TGCCGCCCGG CACCCCGGCC ACGCTGGACG CCCTGCGCAA GGCGGGCGTA 
CCCGTGCTCG CCCACGGCAG TTTCATTACC GTCGCGGTGA ACTTCCTGAT TCTCGCGTTC 
ATCATTTTCA TGATGGTCAA GCAAATCAAC CGGCTCAAGC GCGCGGCGCC GCCCGCACCG 
CCCGCCACCC CGGCCGCGCC GCCGGAGGAC ATCGTGCTGC TGCGCGAGAT CCGCGACAGT 
CTCAGGCGCT GA 

 

Protein sequence

MGIAKEFREF AVKGNVIDLA VGVIIGGAFG KIVDSLVNDV IMPIVGLVFG RLDFSNLFLV 
LGSVPPGTPA TLDALRKAGV PVLAHGSFIT VAVNFLILAF IIFMMVKQIN RLKRAAPPAP 
PATPAAPPED IVLLREIRDS LRR