| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3684 |
|---|
| Symbol | |
|---|
| ID | 4669093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 4061720 |
|---|
| End bp | 4062517 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639824875 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_972006 |
|---|
| Protein GI | 120612328 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4582] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCGG CGCCAGCCGT GCGCCCCCAG GAACCCTGCA GCGTGATTCT TTACGAATAC
CCCTTCAACG AACGCCTCAG AACCTACCTG CGGCTGGAAC AGCTCTTCCG GCGCCTGGGC
GAGCTGATTC CCAGGCCGCA CCCGCTGGAC CACCATTTCG CGCTCGTGAC CCTGTTCGAG
ATCATGGACG TGGCGGCCCG CGCCGACCTG AAGTCCGACG TACTCAAGGA CCTGGAAAAG
CAGCGCCACC AGCTCGACGG CTACCGGGGC AATCCCTCGA TCTCGGAGGC GGTGCTCGAC
GGCGTCATCG CCCAGATCGA CCACTGCTTC TCGACACTGA ACGCGCAGAC CGGCAAGGCA
GGCCAGCCCC TGACCGAGAA CGAATGGCTG ATGAGCATCC GCAGCCGCGT GGGCATTCCC
GGGGGCACCT GCGGCTTCGA TCTGCCCGCC TATTACGCCT GGCAGCACCA TGCGCCCGAA
AAGCGGCAGC ACGACCTCGA GGGCTGGGCG AACCATCTCG CGCCGCTGGC CGAATCGCTG
TACGTGCTGC TGAAGCTGCT GCGCGATTCG GGCATGCCCC AGAAGGTGGC GGCCGACCAC
GGACAGTTCC AGCAGGCCCT GCCCCAGGGG CGCACCTTCC AGCTGCTGCG GCTGCGGATC
GATCCCGCCT GGAACATGGT GCCGGAGATC AGCGGCAACC GGCTCATCGT TTCCGTGAGG
CTCATGCGGC AGGACGCCGA CGGCAAGCTG CAGCCCGTGC AGGAAGACGC GGCCTTCGAA
CTCACGCTCT GCGCGTGA
|
|---|
| Protein sequence | MLAAPAVRPQ EPCSVILYEY PFNERLRTYL RLEQLFRRLG ELIPRPHPLD HHFALVTLFE
IMDVAARADL KSDVLKDLEK QRHQLDGYRG NPSISEAVLD GVIAQIDHCF STLNAQTGKA
GQPLTENEWL MSIRSRVGIP GGTCGFDLPA YYAWQHHAPE KRQHDLEGWA NHLAPLAESL
YVLLKLLRDS GMPQKVAADH GQFQQALPQG RTFQLLRLRI DPAWNMVPEI SGNRLIVSVR
LMRQDADGKL QPVQEDAAFE LTLCA
|
|---|
| |