Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3682 |
Symbol | |
ID | 4669846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | + |
Start bp | 4060187 |
End bp | 4061074 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639824873 |
Product | type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A |
Protein accession | YP_972004 |
Protein GI | 120612326 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.948084 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGTTCG AGCCCTGGCT GCAGGCCGCG GTGTTCGGCC TCGTCGGCCT GCTGATCGGC AGTTTTCTCA ACGTCGTCAT CCACCGCCTT CCGCGCATGA TGGAGGCCGA CTGGGCCGCC GAGTGCGAGG ACTACCTGCG CTCGCAACCG GGTTCCACCA CGACCACGGC CCCCGTGGCG AAGCCGGAGG CGGAGCCCTT CAACCTGGTG ACGCCGCGCT CGCGGTGCCC GGCCTGCGGC CACGCGGTGC GGTGGCACGA GAACATTCCG GTGCTGAGCT ACCTCTGGCT GGGCGGCAAA TGCTCGGCCT GCAAGACCCG CATCAGCCCG CGCTATCCGG CCGTCGAGCT CGCGACCGGG CTGCTGTTCT GGTTCTGCGC CCGGCACTGG GGCGCGACGC CGACGGCGGC GGCCTGGTGC GCCTTCTCCG CCGCGCTGGT CACGCTGGCC TGCATCGACT GGGACACCAC CCTGCTGCCG GACGACATCA CGCTGCCGCT GCTGTGGGGC GGGCTGCTCG GCTCGGCCTT CCAGTGGACT TCCGTGCCGC TCTTCGCCTC GGTGGCGGGC GCGGCTGCCG GCTACCTGTC GCTCTGGGCG GTGTATTGGG CGTTCAAGCT GGCCACGGGC AAGGAGGGCA TGGGCTATGG CGATTTCAAG CTGTTCGCGG CCCTCGGCGC CTGGTTCGGC TGGCAGGCCC TGGTGCCCAT CATCCTGATG GCGTCGGTCA TCGGGGCGCT GGTCGGCATC GGCATGAAGT TCACCCGGGG CCTGCGCGAG GGCAACTACA TCCCCTTCGG CCCGTTCCTC GCCGGCGCCG GGCTCGCCGC CATGCTGTTC GGGCCCGACC GCATATTGAA CGGCATCCTG GGAGCGCTGG GCCTGTGA
|
Protein sequence | MGFEPWLQAA VFGLVGLLIG SFLNVVIHRL PRMMEADWAA ECEDYLRSQP GSTTTTAPVA KPEAEPFNLV TPRSRCPACG HAVRWHENIP VLSYLWLGGK CSACKTRISP RYPAVELATG LLFWFCARHW GATPTAAAWC AFSAALVTLA CIDWDTTLLP DDITLPLLWG GLLGSAFQWT SVPLFASVAG AAAGYLSLWA VYWAFKLATG KEGMGYGDFK LFAALGAWFG WQALVPIILM ASVIGALVGI GMKFTRGLRE GNYIPFGPFL AGAGLAAMLF GPDRILNGIL GALGL
|
| |