| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3681 |
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| Symbol | |
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| ID | 4668357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 4058970 |
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| End bp | 4060187 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639824872 |
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| Product | type II secretion system protein |
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| Protein accession | YP_972003 |
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| Protein GI | 120612325 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCG CTGCATCGAG GGACATCAAG GATTTCGTTT TCGAGTGGGA AGGCAAGGAC
CGCCACGGCA AGGTCGTGCG CGGCGAGGTC CGGGCCCTGG GCGAGAACCA GGTCCAGGCG
ACGCTGCGGC GGCAGGGGGT GCTGCCCACC AAGATCAAGA AGCGCCGGAT GCGCAGCGGC
AAGAAGATCA AGCCCAAGGA CATCGCGCTC TTCACGCGGC AGATGGCCAC GATGATGAAG
GCCGGGGTCC CCCTGCTGCA GGCCTTCGAC ATCGTGGGCC GGGGCAACAC CAACGCCTCG
GTCACCAAGC TGCTCAACGA CATCCGCGCC GACGTGGAAA CCGGTACTTC GCTGAACGCG
GCATTCCGCA AGTACCCGAT GTACTTCGAC AGCCTGTACT GCAACCTGGT GGAAGCCGGG
GAGGCGGCGG GTATCCTGGA AGCACTGCTC GACCGGCTCG CGCTCTACAT GGAGAAGACC
GAGGCCATCA AGTCGAAGAT CCGCTCGGCG CTGATGTATC CGACGGCCGT GATCATCGTG
GCCTTCGTCG TGGTCACCGT CATCATGATC TTCGTGATCC CCGCGTTCAA GGAGGTGTTC
ACCTCGTTCG GTGCCGACCT GCCGGCGCCC ACCCTGTTCG TGATGGGCGT CAGCGAGATC
TTCGTCCAAT GGTGGTGGCT GATCTTCGGC GTGCTGGGCG GCGGCGCATA CTTCTTCATG
CAGGCATGGC GGCGCAACGA GAAGATGCAG ATGTTCATGG ACCGGCTGCT GCTGCGCGTG
CCGGTCTTCG GCGCCCTGAT CGACAAGTCC TGCGTGGCGC GCTGGACCCG CACCCTCTCC
ACGATGTTCG CGGCGGGCGT TCCGCTGGTC GAGGCGCTGG ACTCGGTGGG AGGGGCCTCG
GGCAACTCGG TCTATGCGAT GGCGACCGAA AGGATCCAGC AGGAAGTCTC CACCGGCACC
AGCCTGACGG CCGCGATGGG CAACGCGAAC GTGTTCCCGT CCATGGTGAT CCAGATGTGC
GCCATCGGCG AGGAGTCGGG CTCGATCGAC CACATGCTGG GCAAGGCGGC CGACTTCTAC
GAGGAGGAGG TCGATGAAAT GGTCGCGGGG CTGTCGAGCC TCATGGAGCC GATCATCATC
GTGTTCCTGG GCACCATCAT CGGCGGCATC GTGGTGTCGA TGTACCTGCC CATCTTCAAG
CTGGGACAGG TGATCTGA
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| Protein sequence | MATAASRDIK DFVFEWEGKD RHGKVVRGEV RALGENQVQA TLRRQGVLPT KIKKRRMRSG
KKIKPKDIAL FTRQMATMMK AGVPLLQAFD IVGRGNTNAS VTKLLNDIRA DVETGTSLNA
AFRKYPMYFD SLYCNLVEAG EAAGILEALL DRLALYMEKT EAIKSKIRSA LMYPTAVIIV
AFVVVTVIMI FVIPAFKEVF TSFGADLPAP TLFVMGVSEI FVQWWWLIFG VLGGGAYFFM
QAWRRNEKMQ MFMDRLLLRV PVFGALIDKS CVARWTRTLS TMFAAGVPLV EALDSVGGAS
GNSVYAMATE RIQQEVSTGT SLTAAMGNAN VFPSMVIQMC AIGEESGSID HMLGKAADFY
EEEVDEMVAG LSSLMEPIII VFLGTIIGGI VVSMYLPIFK LGQVI
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