Gene Aave_3678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3678 
Symbol 
ID4668092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp4054878 
End bp4055861 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content65% 
IMG OID639824869 
Producthypothetical protein 
Protein accessionYP_972000 
Protein GI120612322 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATCA GGAGACGAGA TTTCGTGGGA TCGGCCCTGG CAGCGGGGCT GGCGCCGCTG 
TCCTTCGCGA CTACCCAGCC TGCATATCCC GGCAAACCCA TTACGCTCGT GGTGCCGTTC
ACGCCCGGGG GCTCGGTGGA CAACTCCGGC CGCCTGATGG CGGACCGGCT GAGCCGCGAA
CTCGGCGTGG CCGTGGTGGT TGACAACAAG GGCGGCGCAG GCGGCGCGAT GGGTTCCGTT
TACGTCGCGA AAGCCAAGCC GGATGGATAC ACGCTGATCG TGACCTCCCA GAGCACGCAC
GTGGTCAACC CCGCCGTCAA CGCCAACCTG CCGTACGACG CGGTGAAGGA CTTCGCACCC
ATCACGCTGA TCGACCGGCT TGCGAATGTG CTGCTGGTGA ATTCCGACTT GCCGGTGCGC
TCGTTTGCCG AACTGGTCGC GTACGCGCAA GCCAACCCGG GCAAGCTGAA TTACGCCAGC
GCGGGAACGG GTTCGGTGTC GCACCTGAGC ATGGAGCTCT TGAAGAACCA GGCCAAGATG
CCGATGACCC ATATCCCGTA CCGCGGGGCG GGGGTCGCCG TCACCGATCT GATCGCCGGC
CAGGTGCAGC TGACGTGGAA CAACCTCTCT TCCAACCTGG CGAACGTCAG GAACGGCAAG
CTGCGAGCCC TGGCCGTGGC CTCTCCGCAG CGCGTGCCCC AGCTTCCCGG GGTGCCGACG
TTCGCGGAAC TGAACCTGCC GGATCTGAAC CTGACCTCGT GGACAGGCCT GGCCGCGCCA
GCCGGAACGC CGGACGCCAT CATCCAGAAG CTGTACCAGG CAACGCGAAA GGTGCTGCAG
GACCCCGCCA CACGAGCGGT GTGGGAGGAC AAGGGCATGA TGGTGCCCGA GGACGTGAAG
CCACAGGCCT ACCGGGCGGA GATCGTCGAG CGCATCAGGT TTTACCAGCG CATCGCCAAG
GCAAACAACA TCGTGCTGGA ATGA
 
Protein sequence
MHIRRRDFVG SALAAGLAPL SFATTQPAYP GKPITLVVPF TPGGSVDNSG RLMADRLSRE 
LGVAVVVDNK GGAGGAMGSV YVAKAKPDGY TLIVTSQSTH VVNPAVNANL PYDAVKDFAP
ITLIDRLANV LLVNSDLPVR SFAELVAYAQ ANPGKLNYAS AGTGSVSHLS MELLKNQAKM
PMTHIPYRGA GVAVTDLIAG QVQLTWNNLS SNLANVRNGK LRALAVASPQ RVPQLPGVPT
FAELNLPDLN LTSWTGLAAP AGTPDAIIQK LYQATRKVLQ DPATRAVWED KGMMVPEDVK
PQAYRAEIVE RIRFYQRIAK ANNIVLE