| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3652 |
|---|
| Symbol | |
|---|
| ID | 4667184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 4028774 |
|---|
| End bp | 4029625 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639824843 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_971975 |
|---|
| Protein GI | 120612297 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0857223 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGAAC GCAGCCTCAC GCGCGGCATG CTCGCGCACT TCATCATGGT CCTGGGGGTC
GCCATCGTGG CGTTCCCGCT CTACCTCGCC TTCGTGGCGT CCACCCACAC CGCCCAGGAG
ATCGTGCAGG CGCCCATGCC GCTGCTGCCG GGGGGCCACT TCTGGGAAAC CTACTCCGCC
GCGCTCTTCG GACGCGACCA GGGCGCGGGC TCCACCGCCC CCGTGGCGCG CATGATGTGG
GTGAGCCTGG TGTCGGCGCT GGTCATCACG TTCGGCAAGA TCGCCATCTC GCTGATGTCG
GCCTTCGCCA TCGTGTACTT CCGCTTCCCG TTCAAGGGCC TGTGCTTCTG GCTGATCTTC
GTCACGCTGA TGCTGCCGGT GGAAGTGCGC ATCGGACCGA CCTACCAGGT GGTGTCCGAC
CTCGGCATGC TCAACAGCTA CGCGGGCCTC ACGGTGCCGC TGATCGCGTC GGCCACCGCC
ACGTTCCTGT TCCGGCAGTT CTTCCTGACG GTGCCGGACG AACTGGTCGA GGCCGCGCGC
ATCGACGGCG CCGGGCCCAT GCGCTTCTTC AAGGACGTGC TGGTGCCCCT GTCGCGCACC
TCCATCGCCG CCCTCTTCGT GATCCAGTTC ATCTACGGAT GGAACCAGTA CCTCTGGCCA
CTGCTGGCGA CCACGAGCGA GGACATGTAC CCCGTGGTGA TCGGCATCAA GCGCATGATC
GCGGGCGGCG ACGGCCAGAA CGAATGGAAC ATCGTCATGG CCACCGCCAT CCTGGCCATG
CTGCCGCCCG CCGTGGTGGT GATCCTCATG CAGAAATGGT TCGTGAAGGG CCTGGTGGAT
ACCGAGAAGT AG
|
|---|
| Protein sequence | MVERSLTRGM LAHFIMVLGV AIVAFPLYLA FVASTHTAQE IVQAPMPLLP GGHFWETYSA
ALFGRDQGAG STAPVARMMW VSLVSALVIT FGKIAISLMS AFAIVYFRFP FKGLCFWLIF
VTLMLPVEVR IGPTYQVVSD LGMLNSYAGL TVPLIASATA TFLFRQFFLT VPDELVEAAR
IDGAGPMRFF KDVLVPLSRT SIAALFVIQF IYGWNQYLWP LLATTSEDMY PVVIGIKRMI
AGGDGQNEWN IVMATAILAM LPPAVVVILM QKWFVKGLVD TEK
|
|---|
| |