Gene Aave_3612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3612 
Symbol 
ID4666879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand+ 
Start bp3985504 
End bp3986145 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content69% 
IMG OID639824805 
Productpeptidyl-tRNA hydrolase 
Protein accessionYP_971937 
Protein GI120612259 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0193] Peptidyl-tRNA hydrolase 
TIGRFAM ID[TIGR00447] peptidyl-tRNA hydrolase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.821004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAC TGTTTGTGGG CCTGGGCAAC CCCGGGCCGG ATTACGACGC CACGCGGCAC 
AACGCGGGCT TCTGGTGGAT CGACGGGCTG GCCCGCGACC TGAAGGTGCA CCTCGTGCCG 
GAGCGGGCCT ATCACGGGCT GGTCGCCCGG GCGAACGTGA ACGGGCAGAG CGTGTGGCTG 
CTGCAGCCGC AGACCTTCAT GAACCTCTCG GGCAAGTCGG TGGCCGCACT GGCCCGCTTC 
TTCAAGATCC AGCCGCAGGA AATCCTGGTG GCACACGATG AGCTGGACAT CCTGCCGGGA 
CAGGCCAAGC TCAAGCGTGG CGGCAGCCAC GCCGGGCACA ACGGCCTGCG CGACATCCAC 
GCCCAGCTGG GCTCGCCGGA TTACTGGCGC CTGCGCATCG GGATCGGGCA CCCGGGCGTG 
AAGGCCGAGG TGGCGAACTG GGTGCTCAAG AAGCCGTCGC CCGACCACCG CACGCTGATC 
GAGGACAGCA TTGCCCACTC CCTGAAGGCC GCGCCCGCCA TGCTGGCCGG AGACATGGAC 
AAGGCCACGC TGCTGGTGCA CACGACCAAG CCGCCGCGGC CCAAGCCCCC ACGGCCGGCT 
GCGGCACCGG TGGACGCGCC TGCGGCTCCT GGCGACCAGT AG
 
Protein sequence
MIKLFVGLGN PGPDYDATRH NAGFWWIDGL ARDLKVHLVP ERAYHGLVAR ANVNGQSVWL 
LQPQTFMNLS GKSVAALARF FKIQPQEILV AHDELDILPG QAKLKRGGSH AGHNGLRDIH 
AQLGSPDYWR LRIGIGHPGV KAEVANWVLK KPSPDHRTLI EDSIAHSLKA APAMLAGDMD 
KATLLVHTTK PPRPKPPRPA AAPVDAPAAP GDQ