| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3611 |
|---|
| Symbol | |
|---|
| ID | 4666891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 3984742 |
|---|
| End bp | 3985374 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639824804 |
|---|
| Product | 50S ribosomal protein L25/general stress protein Ctc |
|---|
| Protein accession | YP_971936 |
|---|
| Protein GI | 120612258 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1825] Ribosomal protein L25 (general stress protein Ctc) |
|---|
| TIGRFAM ID | [TIGR00731] ribosomal protein L25, Ctc-form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.619147 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTCG TCGCTTTTGA GCGCGCAAAG CAAGGTACGG GTGCGAGCCG CCGTCTGCGC
AATTCGGGCA AGACGCCCGG CATCGTCTAT GGCGGTTCCG CCGAACCCCA ACTCATCGAG
GTGGACCACA ACGCCCTGTG GCACGCCCTG AAGAAGGAAG CCTTCCACTC CAGCGTGCTG
GACATGGAAC TGGCCGGCAA GACCAGCAAG GTGCTGCTGC GCGACGTGCA GTACCACCCG
TACAAGCAAC TGGTCCTACA CATCGACTTC CAGCGCGTGG ACGAGAAGAC CAAGCTGCAC
ATGAAGGTGC CGCTGCACTT CACGGGCGCC GAAGAGTCCC CGGCCGTGAA GATCGACAAG
TGCATGGTCA ACCCCGTGGC GACCGAACTG GACGTGTCCT GCATGCCCTC CGACCTGCCC
GAGTTCATCA ACGTGGACCT GAGCAAGCTG GAAAAGGGCC GTTCGCTGCA CCTGAAGGAC
ATCAAGCTGC CCCGCGGCGT GTCCCCCGTG GTGCGCGGTG GCCAGCAGAA CCCCGTGCTG
GTGTCCGTGG TGCCCCCGGT GGCCGAAGTC GAGGCTCCGG CCGAAGGCGC TGCCGCACCG
GCTCCCGCTC CCGCCAAGAA GGGCAAGAAG TAA
|
|---|
| Protein sequence | MNFVAFERAK QGTGASRRLR NSGKTPGIVY GGSAEPQLIE VDHNALWHAL KKEAFHSSVL
DMELAGKTSK VLLRDVQYHP YKQLVLHIDF QRVDEKTKLH MKVPLHFTGA EESPAVKIDK
CMVNPVATEL DVSCMPSDLP EFINVDLSKL EKGRSLHLKD IKLPRGVSPV VRGGQQNPVL
VSVVPPVAEV EAPAEGAAAP APAPAKKGKK
|
|---|
| |