| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3603 |
|---|
| Symbol | |
|---|
| ID | 4666815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 3975391 |
|---|
| End bp | 3976263 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639824795 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_971928 |
|---|
| Protein GI | 120612250 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1660] Predicted P-loop-containing kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.214493 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00628158 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCAG ACACCCTGGA GATCGTGCTG ATCACGGGCA TGTCGGGCTC CGGCAAGTCC
GTGGCGCTGC ACGCGCTGGA AGACGCGGGC TACTACTGCG TGGACAATCT CCCCCCCGAA
CTCCTCGCGG CCTTCGTGGC GCTCGAGCAC CAGCACCACG GCAACCGGGT GGCCATCGCC
ATGGACGTGC GCAGCGCCAC GGCGCTGCCC CTGGTGCCGC AGCAGCTGCG CCGGCTGCGC
GGGGAAGGCG TGACCGTGCA TTCGCTGTTC CTGGATGCCA CGACGGACAC GCTGGTGCGC
CGCTTCTCGG AAACCCGCCG CCGCCATCCG CTGTCCCGGG ATGAATGGTA TGGCGAGCCG
CATGCGCTCC TGGAAACCCT CGAGCTCGAG CGCGAGCTGC TTGCCGACCT GCGCGAGCAA
TCGCACGTCA TCGACACCAG TGCCATCCGC GCCGCGCAGT TGCAGGGTTA CGTGAAGAGC
CTGATGCCCG CGCTGCCCGG GCAACTGACG CTGGTGTTCC AGTCGTTCGC GTTCAAGCGG
GGCGTGCCGG TGGACGCGGA CTATGTCTTC GACGTACGCA TGCTGCCGAA CCCGCACTAC
GAGCCGGGTC TGCGCAACCT CACCGGCAAG GACCAGCCGG TGGTGCATTA CCTGGAACAG
GCCCGGGAGG TGCGGCAGAT GCGCGAACAC ATCACCCATT TCCTGGGGCA CTGGCTGGAG
CCGCTGGCCC AGAACCACCG CAGCTATGTC ACGGTGGCGA TCGGCTGCAC GGGGGGGCAG
CACCGGTCCG TGTATCTCGT CGAGCAGCTC GCAGCGGAAT TTTCAGACCG CTGGACGACG
CTGCGACGGC ACCGGGAACT CGACGGGCGC TAG
|
|---|
| Protein sequence | MMADTLEIVL ITGMSGSGKS VALHALEDAG YYCVDNLPPE LLAAFVALEH QHHGNRVAIA
MDVRSATALP LVPQQLRRLR GEGVTVHSLF LDATTDTLVR RFSETRRRHP LSRDEWYGEP
HALLETLELE RELLADLREQ SHVIDTSAIR AAQLQGYVKS LMPALPGQLT LVFQSFAFKR
GVPVDADYVF DVRMLPNPHY EPGLRNLTGK DQPVVHYLEQ AREVRQMREH ITHFLGHWLE
PLAQNHRSYV TVAIGCTGGQ HRSVYLVEQL AAEFSDRWTT LRRHRELDGR
|
|---|
| |