| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3593 |
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| Symbol | hrcA |
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| ID | 4666977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3963779 |
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| End bp | 3964783 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639824785 |
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| Product | heat-inducible transcription repressor |
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| Protein accession | YP_971918 |
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| Protein GI | 120612240 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.294148 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00295463 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCGATG ACCGTGCCAA GTTGTTGCTC AAAGCGCTGA TCGAGCGCTA CATCGCCGAC
GGCCAGCCGG TGGGATCGCG CACCCTGTCC AGGTCGTCGG GGCTGGATCT TTCGCCGGCG
ACCATCCGCA ACGTCATGGC CGACCTGGAG GACATCGGGC TGATCGCCAG CCCCCACACC
TCGGCGGGCC GCATCCCCAC GGCCAAAGGC TACCGTCTGT TCGTTGACAC CATGTTGACG
GTGCAGCGCG GCGAGCTGTG CTCCCCCGAG CTCGCTCCCG ACCAGCCGCA GAAGGTCATC
GCGAACGCGG CGCAGCTGCT GTCCAGCCTT TCGCAGTTCG TGGGCGTCGT CATGGCTCCG
CGCCGGCCGT CGGTCTTTCG CCACATCGAG TTCCTCCGCC TTTCGGAGCG GCGCCTGCTG
GTCATCATCG TCTCGCCGGA CGGCGACGTG CAGAACCGCG TGATCTTCAC CGAAGTGGAC
CATTCCCAGT CCCAGCTGGC CGAGGCCGCC AACTTCCTCA ACAGCCATTA TTCCGGCCTG
GGGATGGAAG AGGTGCGCGA GCGGCTCAAG ACCGAGGTGG ACCAGTTGCG CGGAGAGATC
GCTTCCCTCA TGCAGGCCGC GGTGAACGTC GGCTCCGAGG CCATGGCCGC CTCGCAGGAG
GAGGTGGTCA TCTCCGGCGA GCGCAACCTG CTGGCCCTGA GCGATTTCTC GAACGACATG
GGCAACCTGC GCAAGGCCTT CGACCTCTTC GAGCAGAAGA CCCAGATACT GCGCCTGCTG
GACGTCTCCA ACCGGGCCGA GGGGGTGCGC ATCTTCATCG GGGGCGAAAG CCAGGTCGTG
CCGTTCGAGG AGCTCTCGGT GGTCAGCGCC CCCTACGAGG TGGACGGGCA GGTCGTGGGC
ACGCTGGGCG TCATCGGTCC TACGCGCATG CCCTACGACC GCATGATCCA GATCGTGGAC
ATCACCTCCA AGCTGGTGAC CAACGCGCTG AGCCATCGCC GCTAG
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| Protein sequence | MLDDRAKLLL KALIERYIAD GQPVGSRTLS RSSGLDLSPA TIRNVMADLE DIGLIASPHT
SAGRIPTAKG YRLFVDTMLT VQRGELCSPE LAPDQPQKVI ANAAQLLSSL SQFVGVVMAP
RRPSVFRHIE FLRLSERRLL VIIVSPDGDV QNRVIFTEVD HSQSQLAEAA NFLNSHYSGL
GMEEVRERLK TEVDQLRGEI ASLMQAAVNV GSEAMAASQE EVVISGERNL LALSDFSNDM
GNLRKAFDLF EQKTQILRLL DVSNRAEGVR IFIGGESQVV PFEELSVVSA PYEVDGQVVG
TLGVIGPTRM PYDRMIQIVD ITSKLVTNAL SHRR
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