| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3589 |
|---|
| Symbol | |
|---|
| ID | 4667385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 3959891 |
|---|
| End bp | 3960568 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639824781 |
|---|
| Product | putative phage repressor |
|---|
| Protein accession | YP_971914 |
|---|
| Protein GI | 120612236 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2932] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00136688 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00299337 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCATGAGA GCACCGCCCG CCTTTACCAA GCCGCGTCCG AGATCAGGGA TGTTGCAGGC
CAGTCCGCAG TAGCCCGGCT GCTCGGTGAG TCGCCCCAGA ATCTCAAGAA CTGGGAGGTG
CGGGGAGTTT CCAAGGCGGG GGCACTCAAG GCCGAGGAGC TCATCGGTTG CTCGGCCGCC
TGGGTGCTGA CGGGCGACGG GCCGGCGACC AGGCGCGGGG AAACGACTGC CCGGCCGCCT
TCACCGGAAA GCAGCGTGTC GGTGCCTCAG TTGGCGAACA CCGCGTCCAT GGGCACCGGG
AGCGAGATGG TCCCTGAAGA TGTCATGGTC GGTCACCTCA CGTTGTCGCC GGCATGGATC
GGCAGGACGC TGCGCGGCCT GAGCACGCCG GAGAACCTGC GCTTCATCCA TGCCTATGGG
GACTCCATGG AGCCCACGTT CCTGGATGGC GACGTGCTCC TCGTGGACGC GGGCGTACGC
ACCCTGGAGG TGGACGGGAT CTATGTGCTG GCGGCCCAGA ACCGCCTCTT CATCAAGCGG
GTGCGCCAGC GTCTGGACGG GGCCTACGAG ATCAGCAGCG ACAACCCCAC CGTGAAGACG
GTGGACGTGC TGGACGGCAA GCACGCGGTA GAGATCCTGG GCAAAGTCAT CTGGATCTGG
AACGGACGGA AGATCTGA
|
|---|
| Protein sequence | MHESTARLYQ AASEIRDVAG QSAVARLLGE SPQNLKNWEV RGVSKAGALK AEELIGCSAA
WVLTGDGPAT RRGETTARPP SPESSVSVPQ LANTASMGTG SEMVPEDVMV GHLTLSPAWI
GRTLRGLSTP ENLRFIHAYG DSMEPTFLDG DVLLVDAGVR TLEVDGIYVL AAQNRLFIKR
VRQRLDGAYE ISSDNPTVKT VDVLDGKHAV EILGKVIWIW NGRKI
|
|---|
| |