| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3585 |
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| Symbol | |
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| ID | 4667621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3955327 |
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| End bp | 3957594 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639824776 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_971910 |
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| Protein GI | 120612232 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0460263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0119748 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAGG TCCTGACCAA ACCCTCCGCC CCGGAGCCGC GCCCCGGCAG CGCCCCGGCG
GCGGGCGCGT CCGCGGCGGC CGCCAATGCG GCCGCCGCCA GTTTCGCCTC GCTCACCGAG
AACCTCGATT ACCTCGATGC GGCCAGCATC GAGCAGGTGC GGCAGGCCTA CAAATTCGCT
GACAAGGCCC ACCTGGGGCA ACTGCGCAGC AGCGGCGAGC CCTACATCAC CCATCCCATC
GCGGTGGCCG CCCAGTGCGC CACCTGGAAG CTCGACGCCC AGGCCCTGAT GGCAGCGCTG
CTGCACGATG CGATGGAAGA CTGCGGCGTC ACGAAGGCCG ACCTGCTGGA ACGCTTCGGC
CCGCAGGTCG CCGAACTCGT GGACGGCCTC ACCAAGCTCG ACAAACTGCA GTTCAACACC
CGCGAGGAGA ACCAGGCCGA GTCCTTCCGC AAGATGCTGC TGGCGATGGC GCGCGACGTG
CGTGTCATCC TCATCAAGCT GGCGGACCGC ACGCACAACA TGCGCACGCT CTCGGACATG
CCGCGCACCA AGTGGGGCCG CATCGCATCC GAGACGCTCG AGATCTACGC CCCCATCGCC
CACCGCCTGG GCCTGAACCA GACCTACCGC GAGCTCCAGG ACCTCTCCTT CCGGCACCTG
CATCCCTGGC GCTACGCCAC CCTCTCCAAG GCCGTGAACA AGGCGCGCAA CCGCCGGCGC
GACCTCATCC AGAAGGTGCA GGCCGAGGTG GACGCCGCCT TCGCCCGCAT CGGCATGAAG
GCCCGGCTCG CCGGCCGCGA AAAGACGCTC TACGCCATCT ACCAGAAGAT GGACACCAAG
CACCTGAGCT TCGCCCAGGT GACGGACATC TACGGCTTCC GGGTGATCGT GTCGTCGGTG
ACCGACTGCT ACACCGCACT GGGCGTCCTC CACCAGCTCT ACAAGCCCGT GCCGGGCCGG
TTCAAGGACC ACATCGCCAT CGCCAAGCTC AACGGCTACC AATCGCTGCA CACCACGCTC
GTGGGCCCCT CCGGCGTCAA CATCGAGTTC CAGATGCGCA CCGAGGAGAT GCACGTGGTG
GCCGAGGCCG GCGTTGCGGC GCACTGGCTC TACAAGGCCG AGAACGCCGA GGGCGGCACG
GCCGAACGCC TGGGCACCAA ATGGCTGCAG TCGCTGCTGG ACATCCAGAA CGAGACGCGC
GACGCCGCCG AATTCTGGGA CCACGTGAAG GTGGACCTGT TCCCGGACGC GGTTTACGTG
TTCACGCCCA AGAGCCAGAT CATGGCCCTG CCCCGCGGCG CGACCGTCGT GGACTTCGCC
TATGCCATCC ACAGCAACGT GGGTGACCGG GCGACGGCCG CGAAGATCAA CAACGAGCAG
GTCCCGCTGC GCACCGAGCT GAAGAACGGC GACGTGGTGG AGATCATCAC CGCGCCCGTC
TCCACCCCCA ACCCCGCGTG GCTGGGCTTC GTGCGCACCG GCCGCGCACG CTCGAAGATC
CGCCACTACC TCAAGACCCT CGCGCACACC GAGTCCGCCG GGCTGGGAGA GAAGCTGCTC
ACCCAGGCGC TGCGGGCCGA GGGCCTGGAG CGCCTGCCCT CGGAAGAAGA GAACCAGGCC
CTCTGGGACA AACTGCTGCG CTTCACCGGC AACCGCACGC GCACCGAGCT CATGACCGAC
ATCGGCCTGG GCAAGCGCAT CGCAGGCATC GTGGCCAAAC GGCTCATGGT GTTGATGGCC
GAACACGGCC ACCGCCCGGA CGCCCTGCTG CTGACCCGTG AGCGCTATAC CTCGCACGAG
AACCTGTCGC AGGGCGGCGT CACGCTGGAC GGCAGCGAGA ACGCCTCCGT GCAGTACGCC
AGTTGCTGCA GGCCGGTGCC GGGCGATCCG ATCGTCGGCT ACCTGGGCCG CGGCGAAGGA
CTCGTCGTCC ACAACGCCCA ATGCGGTGTG GCCAAGAAAC TCCAGCACAA GGACAGCGAG
CGCTTCATCA CCGTCGATTG GGCGGACGAG CCGACCCGCA TGTTCGAAAC CGGCATCGTG
GTGACGGTCA CCAACGGCAA GGGCGTGCTG GCACGCATCG CCGCGGAACT CGCCAGCTCC
GAGGCGGACA TCGTGCATGT GGACATGGAC GAGGAAAAGG CCATGGACAC GACCGACCTG
CGCCTCGTGG TGGCCGTGCG CGACCAGGCG CACGTCGAGG CCGCGCTGCG CAACCTGCGG
CGCACCACGG CCGTCCTGCG CGCCTTCCGC ATCCTGCCGT CGCCCTAG
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| Protein sequence | MNEVLTKPSA PEPRPGSAPA AGASAAAANA AAASFASLTE NLDYLDAASI EQVRQAYKFA
DKAHLGQLRS SGEPYITHPI AVAAQCATWK LDAQALMAAL LHDAMEDCGV TKADLLERFG
PQVAELVDGL TKLDKLQFNT REENQAESFR KMLLAMARDV RVILIKLADR THNMRTLSDM
PRTKWGRIAS ETLEIYAPIA HRLGLNQTYR ELQDLSFRHL HPWRYATLSK AVNKARNRRR
DLIQKVQAEV DAAFARIGMK ARLAGREKTL YAIYQKMDTK HLSFAQVTDI YGFRVIVSSV
TDCYTALGVL HQLYKPVPGR FKDHIAIAKL NGYQSLHTTL VGPSGVNIEF QMRTEEMHVV
AEAGVAAHWL YKAENAEGGT AERLGTKWLQ SLLDIQNETR DAAEFWDHVK VDLFPDAVYV
FTPKSQIMAL PRGATVVDFA YAIHSNVGDR ATAAKINNEQ VPLRTELKNG DVVEIITAPV
STPNPAWLGF VRTGRARSKI RHYLKTLAHT ESAGLGEKLL TQALRAEGLE RLPSEEENQA
LWDKLLRFTG NRTRTELMTD IGLGKRIAGI VAKRLMVLMA EHGHRPDALL LTRERYTSHE
NLSQGGVTLD GSENASVQYA SCCRPVPGDP IVGYLGRGEG LVVHNAQCGV AKKLQHKDSE
RFITVDWADE PTRMFETGIV VTVTNGKGVL ARIAAELASS EADIVHVDMD EEKAMDTTDL
RLVVAVRDQA HVEAALRNLR RTTAVLRAFR ILPSP
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