Gene Aave_3583 details

Gene Information

• Locus tag: Aave_3583
• Symbol: gmk
• ID: 4667771
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidovorax citrulli AAC00-1
• Kingdom: Bacteria
• Replicon accession: NC_008752
• Strand: +
• Start bp: 3954380
• End bp: 3955000
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639824774
• Product: guanylate kinase
• Protein accession: YP_971908
• Protein GI: 120612230
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0194] Guanylate kinase
• TIGRFAM ID: [TIGR03263] guanylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00415905
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.118983
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGACTATC CCGGAAATCT CTTCGTAGTG GCGGCGCCGA GCGGCGCAGG CAAGTCGAGC 
CTGGTCAAGG CCCTGCTCGA ACTCGACTCC CACGTGCAGC CCTCCGTCTC CCACACCACG 
CGCCCGCCGC GCGGCCAGGA GCGGCACGGG CGCGAGTACT TCTTCACCTC GGAGCAGGAG 
TTCGACGCGA TGGTCGCCGC CAACGGCTTC ATCGAGTGGG CGCACGTGCA CGGGCGCCGC 
TACGGCACCT CCCGCAAGGG CATCGAGGAA CGCATCGGCC AGGGCGCGGA CGTGATCCTC 
GAGATCGACT TCCAGGGAGC CATGCAGGTG AAGGAAGCCT TCTCCAACGC CGTGCTCATC 
TTCATCCTGC CGCCGAGCTG GGAAGAGCTG CGCTCGCGGC TGGAGCGCCG CGGCGAGGAC 
GCTCCCGAGG TGATCGAGCT GCGGCTCAAG AATGCGGCCG TCGAAATGGC GCAGGCCGCC 
AAATTCGACT TCGTTATAAT CAACGAGCTT TTCGAACGGG CGCTTTTCGA CATGAAAACC 
GTTGTTCACG CCCAGCGGCT CAAGTACGCA GCCCAGCGCC GGGCCCGGGC CGACACCTTC 
GAATCCCTCA ATATCGTCTA G 

 

Protein sequence

MDYPGNLFVV AAPSGAGKSS LVKALLELDS HVQPSVSHTT RPPRGQERHG REYFFTSEQE 
FDAMVAANGF IEWAHVHGRR YGTSRKGIEE RIGQGADVIL EIDFQGAMQV KEAFSNAVLI 
FILPPSWEEL RSRLERRGED APEVIELRLK NAAVEMAQAA KFDFVIINEL FERALFDMKT 
VVHAQRLKYA AQRRARADTF ESLNIV