| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3570 |
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| Symbol | |
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| ID | 4668452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3941359 |
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| End bp | 3942024 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639824761 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_971895 |
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| Protein GI | 120612217 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATCG TCCGCAAGCC CCTGGCAGAG CAGCCTCCCG CGAGGACCGC TTTCGCTCTG
CCTCCCTACC TGTCGATTGT GTCGAAGTAT CACACCGAAG GACTGCCTTC ATCGCCTTCG
TCGGAAGCGT GGATCGCCCT GGTGCGCGCC GTGGCCGACC ACGGCGACCG GCAGGCCTTC
GCGGCGCTGT TCAAGCATTT CGCCCCGCGG GTGAAGGCCT ACCTGATGCG CCTCGGCCTG
GCGGAGGGCG TGGCGGAAGA CCTCACGCAG GAAGCGATGG TCAATCTCTG GCGCAGGGCG
GGCACCTTCG ACCCGGCGCA TGCGGGTGTC TCCACGTGGG TGTTCACCAT CGCGCGGAAC
CTGCGCATCG ACCATCTGCG CCGCAAGTCC AACCAGTTGT CCGAAAGCGA CGACGGGCTC
GACATGGCCC TGGACGACGA TGGCCCCGAG GAGCTGGCCT ACGCCGCCCA GTGCGAAAAC
GACGTGCGGC GGGCGATCGA GTCGCTCGCC CCCGAACAGG CACAGGTGCT GCGCCGCTCC
TTCTTCGAGG ACCAGCCCCA CGCCCGGATC GCCGAGGATC TCGGCATCCC GCTGGGGACC
GTGAAATCCC GCGTGCGCCT GGCCGTACGC CACCTGCGCC GCCTGCTCGG CGCCCATGCG
CCATGA
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| Protein sequence | MTIVRKPLAE QPPARTAFAL PPYLSIVSKY HTEGLPSSPS SEAWIALVRA VADHGDRQAF
AALFKHFAPR VKAYLMRLGL AEGVAEDLTQ EAMVNLWRRA GTFDPAHAGV STWVFTIARN
LRIDHLRRKS NQLSESDDGL DMALDDDGPE ELAYAAQCEN DVRRAIESLA PEQAQVLRRS
FFEDQPHARI AEDLGIPLGT VKSRVRLAVR HLRRLLGAHA P
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