Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3562 |
Symbol | |
ID | 4669577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3934508 |
End bp | 3935041 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639824753 |
Product | isochorismatase hydrolase |
Protein accession | YP_971887 |
Protein GI | 120612209 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.357759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGCTCC TCGTGGACGT GGTCAATCCG TTGAACTTTC CCGGCGCCGA TGTTTTGCTG CCGGGCGCCG TCCGCGCCGC GCGGGCCACG CTGCGGCTGC GCGAGCAACT GGAAGGCCGC CATGTGCCGG TGATCTATGC CAATGACAAC TACGGCACCT GGCACAGCGA ATTCAGCGAC CTGCTGGCGG CCTGCCGGCA ACTGCCCGGC GCGCGCGGCG AGCTGGCCCG CCTCATGTCT CCCCGGCCGC GCGACCTGAC ACTGCTCAAG CCTTGCCATT CGGCGTTCCA GTCCACGCCG TTGCTCCATC TGCTGCGGCA GATGGGCACG CAGCGTGTCA TCGTGGCGGG CCTGGCCGCG GACATGTGCG TGATGCTCAG CGCCACCGAT GCGCGCATGC TCGGCTACGA CGTCTGGGTG CCCGGGGACT GCACCGCCGC CGAAAGCCCT GCGCGCAAGC GCAATGCCCT GCGCCAGCTG GAACAGGCTT TCCGGTGCGA CGTGCGGCCC GGTGTGTCGG CCTCCGGCAA CTGA
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Protein sequence | MLLLVDVVNP LNFPGADVLL PGAVRAARAT LRLREQLEGR HVPVIYANDN YGTWHSEFSD LLAACRQLPG ARGELARLMS PRPRDLTLLK PCHSAFQSTP LLHLLRQMGT QRVIVAGLAA DMCVMLSATD ARMLGYDVWV PGDCTAAESP ARKRNALRQL EQAFRCDVRP GVSASGN
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