Gene Aave_3562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3562 
Symbol 
ID4669577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3934508 
End bp3935041 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content69% 
IMG OID639824753 
Productisochorismatase hydrolase 
Protein accessionYP_971887 
Protein GI120612209 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.357759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCTCC TCGTGGACGT GGTCAATCCG TTGAACTTTC CCGGCGCCGA TGTTTTGCTG 
CCGGGCGCCG TCCGCGCCGC GCGGGCCACG CTGCGGCTGC GCGAGCAACT GGAAGGCCGC
CATGTGCCGG TGATCTATGC CAATGACAAC TACGGCACCT GGCACAGCGA ATTCAGCGAC
CTGCTGGCGG CCTGCCGGCA ACTGCCCGGC GCGCGCGGCG AGCTGGCCCG CCTCATGTCT
CCCCGGCCGC GCGACCTGAC ACTGCTCAAG CCTTGCCATT CGGCGTTCCA GTCCACGCCG
TTGCTCCATC TGCTGCGGCA GATGGGCACG CAGCGTGTCA TCGTGGCGGG CCTGGCCGCG
GACATGTGCG TGATGCTCAG CGCCACCGAT GCGCGCATGC TCGGCTACGA CGTCTGGGTG
CCCGGGGACT GCACCGCCGC CGAAAGCCCT GCGCGCAAGC GCAATGCCCT GCGCCAGCTG
GAACAGGCTT TCCGGTGCGA CGTGCGGCCC GGTGTGTCGG CCTCCGGCAA CTGA
 
Protein sequence
MLLLVDVVNP LNFPGADVLL PGAVRAARAT LRLREQLEGR HVPVIYANDN YGTWHSEFSD 
LLAACRQLPG ARGELARLMS PRPRDLTLLK PCHSAFQSTP LLHLLRQMGT QRVIVAGLAA
DMCVMLSATD ARMLGYDVWV PGDCTAAESP ARKRNALRQL EQAFRCDVRP GVSASGN