| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3557 |
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| Symbol | |
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| ID | 4669253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3930298 |
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| End bp | 3932007 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639824748 |
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| Product | cytochrome-c oxidase |
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| Protein accession | YP_971882 |
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| Protein GI | 120612204 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0159482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.969865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCATT CCGCCGTGCC TCCTTCCGGC ACCGTGCAGG CGCCGGGCCC TGCTGCTGCC
GCAGCGGTGG CCGGGGCCGC CGCTATCCCG GCCAGCGGGC ACGGCGACGG ACACCACGGC
ACCCATTCCG AAGCGCACGG CCCCGTGCCG ACGGGCTGGC GCCGCTGGCT GAACGCCACC
AGCCACAAGG ACATCGGCAC GCTGTACCTG CTGTTCAGCT TCGCGATGTT CATGGTCGGG
GGCGTGTTCG CCATGCTGAT CCGGCTCGAA CTGCTGCAGC CGGGCCTGCA GATTCTCAAC
CCGGAGACCT ACAACCAGCT GGTCACCATG CACGGCCTGG TCATGGTGTT CGGCGCGATC
ATGCCGGCGT TCGTGGGCTT CGCGAACTGG ATGATCCCGC TGCAGATCGG CGCGTCCGAC
ATGGCCTTCG CGCGCATGAA CAATTTCAGC TTCTGGCTGC TGTTCTTCGC GGGGCTGCTG
CTGCTCGGCT CGTTCTTCAC CACGGGCGGT GCCGTGGCCG CCGGCTGGAC CCTCTACGCG
CCGCTCACCC TGCAGATGGG GCCGGGCATG GACATGGCGA TCTTCGCGAT CCACCTCATG
GGCGCGAGCT CCATCATGGG CGCGATCAAC ATCATCGTGA CCATCCTCAA CATGCGTGCG
CCGGGCATGA CGCTCATGAA GATGCCGCTG TTCTGCTGGT CCTGGCTGAT CACCGCCTAC
CTGCTCATCG CGGTGATGCC CGTGCTCGCG GGCGCCATCA CCATGACGCT CACCGACCGG
CACTTCGGCA CCACCTTCTT CAACGCATCG GGCGGCGGCG ACCCGGTGCT CTACCAGCAC
ATCTTCTGGT TCTTCGGGCA TCCGGAGGTG TACATCATGA TCCTGCCGGC CTTCGGCATC
GTGAGCCACG TCATCCCCAC CTTCGCGCGC AAGAAGCTCT TCGGCTACAG CTCCATGGTG
TATGCGCTCG CGGCCATCGC CATCCTGTCG TTCATCGTCT GGGCGCACCA CATGTTCGCC
ACCGGCATGC CCGTGACCGG CCAGCTGTTC TTCATGTACG CCACCATGCT CGTGGCCGTG
CCCACCGCCG TGAAGGTCTT CAACTGGACC GCCACCATGT GGCGCGGCTC CATGACCTTC
GAGACCCCGA TGCTGTTCGC GGTGGGCTTC ATCTTCGTCT TCAGCATCGG CGGCCTGAGC
GGCGTCATGC TCTCCATCGC GCCGCTCGAC CTGCAATACC ACGACACCTA TTTCGTGGTG
GCGCACTTCC ACTACGTACT GGTCGCCGGG TCGCTCTTCG CGATGTTCGC GGGCTACTAC
TACTGGGTGC CCAAATGGAC GGGCGTGATG TACTCCGAGC GGCGCGGCCA GTGGCATTTC
TGGACGTCGA TCGTCTCGCT GAACGTCACT TTCTTCCCCA TGCATTTCCT GGGACTGGCC
GGCATGCCGC GGCGGTACGT GGACTACGCG GCGCAGTTCA CCGATTTCCA CGCACTGACC
AGCGTCGCGG CCATCGTTTT CGGCTTCTCC CAGGTGTACT TCCTCTTCGC CGTGCTGCTG
CCGGCGCTGC GCCACCGCGG CGCGCCGGCC GGCGCACGGC CGTGGGAAGG GGCAGAGGGG
CTGGAGTGGG AAGTGCCGTC ACCGGCGCCG ATGCACACCT TCGTCACGCC GCCGCGGCTG
GATGCCAGCG CCACGCGGGT GGTGGCGTGA
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| Protein sequence | MTHSAVPPSG TVQAPGPAAA AAVAGAAAIP ASGHGDGHHG THSEAHGPVP TGWRRWLNAT
SHKDIGTLYL LFSFAMFMVG GVFAMLIRLE LLQPGLQILN PETYNQLVTM HGLVMVFGAI
MPAFVGFANW MIPLQIGASD MAFARMNNFS FWLLFFAGLL LLGSFFTTGG AVAAGWTLYA
PLTLQMGPGM DMAIFAIHLM GASSIMGAIN IIVTILNMRA PGMTLMKMPL FCWSWLITAY
LLIAVMPVLA GAITMTLTDR HFGTTFFNAS GGGDPVLYQH IFWFFGHPEV YIMILPAFGI
VSHVIPTFAR KKLFGYSSMV YALAAIAILS FIVWAHHMFA TGMPVTGQLF FMYATMLVAV
PTAVKVFNWT ATMWRGSMTF ETPMLFAVGF IFVFSIGGLS GVMLSIAPLD LQYHDTYFVV
AHFHYVLVAG SLFAMFAGYY YWVPKWTGVM YSERRGQWHF WTSIVSLNVT FFPMHFLGLA
GMPRRYVDYA AQFTDFHALT SVAAIVFGFS QVYFLFAVLL PALRHRGAPA GARPWEGAEG
LEWEVPSPAP MHTFVTPPRL DASATRVVA
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