Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aave_3557 |
Symbol | |
ID | 4669253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax citrulli AAC00-1 |
Kingdom | Bacteria |
Replicon accession | NC_008752 |
Strand | - |
Start bp | 3930298 |
End bp | 3932007 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639824748 |
Product | cytochrome-c oxidase |
Protein accession | YP_971882 |
Protein GI | 120612204 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0159482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.969865 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCATT CCGCCGTGCC TCCTTCCGGC ACCGTGCAGG CGCCGGGCCC TGCTGCTGCC GCAGCGGTGG CCGGGGCCGC CGCTATCCCG GCCAGCGGGC ACGGCGACGG ACACCACGGC ACCCATTCCG AAGCGCACGG CCCCGTGCCG ACGGGCTGGC GCCGCTGGCT GAACGCCACC AGCCACAAGG ACATCGGCAC GCTGTACCTG CTGTTCAGCT TCGCGATGTT CATGGTCGGG GGCGTGTTCG CCATGCTGAT CCGGCTCGAA CTGCTGCAGC CGGGCCTGCA GATTCTCAAC CCGGAGACCT ACAACCAGCT GGTCACCATG CACGGCCTGG TCATGGTGTT CGGCGCGATC ATGCCGGCGT TCGTGGGCTT CGCGAACTGG ATGATCCCGC TGCAGATCGG CGCGTCCGAC ATGGCCTTCG CGCGCATGAA CAATTTCAGC TTCTGGCTGC TGTTCTTCGC GGGGCTGCTG CTGCTCGGCT CGTTCTTCAC CACGGGCGGT GCCGTGGCCG CCGGCTGGAC CCTCTACGCG CCGCTCACCC TGCAGATGGG GCCGGGCATG GACATGGCGA TCTTCGCGAT CCACCTCATG GGCGCGAGCT CCATCATGGG CGCGATCAAC ATCATCGTGA CCATCCTCAA CATGCGTGCG CCGGGCATGA CGCTCATGAA GATGCCGCTG TTCTGCTGGT CCTGGCTGAT CACCGCCTAC CTGCTCATCG CGGTGATGCC CGTGCTCGCG GGCGCCATCA CCATGACGCT CACCGACCGG CACTTCGGCA CCACCTTCTT CAACGCATCG GGCGGCGGCG ACCCGGTGCT CTACCAGCAC ATCTTCTGGT TCTTCGGGCA TCCGGAGGTG TACATCATGA TCCTGCCGGC CTTCGGCATC GTGAGCCACG TCATCCCCAC CTTCGCGCGC AAGAAGCTCT TCGGCTACAG CTCCATGGTG TATGCGCTCG CGGCCATCGC CATCCTGTCG TTCATCGTCT GGGCGCACCA CATGTTCGCC ACCGGCATGC CCGTGACCGG CCAGCTGTTC TTCATGTACG CCACCATGCT CGTGGCCGTG CCCACCGCCG TGAAGGTCTT CAACTGGACC GCCACCATGT GGCGCGGCTC CATGACCTTC GAGACCCCGA TGCTGTTCGC GGTGGGCTTC ATCTTCGTCT TCAGCATCGG CGGCCTGAGC GGCGTCATGC TCTCCATCGC GCCGCTCGAC CTGCAATACC ACGACACCTA TTTCGTGGTG GCGCACTTCC ACTACGTACT GGTCGCCGGG TCGCTCTTCG CGATGTTCGC GGGCTACTAC TACTGGGTGC CCAAATGGAC GGGCGTGATG TACTCCGAGC GGCGCGGCCA GTGGCATTTC TGGACGTCGA TCGTCTCGCT GAACGTCACT TTCTTCCCCA TGCATTTCCT GGGACTGGCC GGCATGCCGC GGCGGTACGT GGACTACGCG GCGCAGTTCA CCGATTTCCA CGCACTGACC AGCGTCGCGG CCATCGTTTT CGGCTTCTCC CAGGTGTACT TCCTCTTCGC CGTGCTGCTG CCGGCGCTGC GCCACCGCGG CGCGCCGGCC GGCGCACGGC CGTGGGAAGG GGCAGAGGGG CTGGAGTGGG AAGTGCCGTC ACCGGCGCCG ATGCACACCT TCGTCACGCC GCCGCGGCTG GATGCCAGCG CCACGCGGGT GGTGGCGTGA
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Protein sequence | MTHSAVPPSG TVQAPGPAAA AAVAGAAAIP ASGHGDGHHG THSEAHGPVP TGWRRWLNAT SHKDIGTLYL LFSFAMFMVG GVFAMLIRLE LLQPGLQILN PETYNQLVTM HGLVMVFGAI MPAFVGFANW MIPLQIGASD MAFARMNNFS FWLLFFAGLL LLGSFFTTGG AVAAGWTLYA PLTLQMGPGM DMAIFAIHLM GASSIMGAIN IIVTILNMRA PGMTLMKMPL FCWSWLITAY LLIAVMPVLA GAITMTLTDR HFGTTFFNAS GGGDPVLYQH IFWFFGHPEV YIMILPAFGI VSHVIPTFAR KKLFGYSSMV YALAAIAILS FIVWAHHMFA TGMPVTGQLF FMYATMLVAV PTAVKVFNWT ATMWRGSMTF ETPMLFAVGF IFVFSIGGLS GVMLSIAPLD LQYHDTYFVV AHFHYVLVAG SLFAMFAGYY YWVPKWTGVM YSERRGQWHF WTSIVSLNVT FFPMHFLGLA GMPRRYVDYA AQFTDFHALT SVAAIVFGFS QVYFLFAVLL PALRHRGAPA GARPWEGAEG LEWEVPSPAP MHTFVTPPRL DASATRVVA
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