| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3555 |
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| Symbol | |
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| ID | 4669318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | + |
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| Start bp | 3928561 |
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| End bp | 3929694 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639824746 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_971880 |
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| Protein GI | 120612202 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.49964 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.644656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTGC CCTCCGCTCC TGCCTCCCCC GCCGATTTGA TGCAGCTTGC GCTCCAGCTG
GCAGAAGACG GGCTCTACAG GACCTCCCCC AATCCCCGCG TGGGATGCGT GCTGGTGAAC
GCCGGCCAGC AGATCATCGG CCAGGGATCG ACACAGCGCG CCGGTGGGCC CCACGCAGAA
GTGATGGCGT TGCGCGATGC CCGGGCCCGG GGCCATGCCA CGCACGGCGC CACTGCCTAC
GTCACCCTGG AGCCCTGCTC CCACCACGGC CGCACGGGCC CCTGCTGCGA TGCGCTGGTG
GAAGCAGGCA TCGCCCGCGT GGTCGCCTCG CTGGCCGATC CCAATCCGCT GGTGGCGGGA
CAGGGTTTCG AGCGTCTCCG GGGAGCGGGC GTACAAGTCG AAGTAGGCCC GGGCGCCGCG
GCGTCGCGGG AACTCAACAT CGGCTTCTTC AGCCGCATGC AGCGCGGCCT GCCCTGGGTG
CGCATGAAGG CAGCCACGTC GCTGGATGGA TTCACCGCAC TGCCCGACGG CACCAGCCAG
TGGATCACTT CGCCCGAAGC GCGCGCCGAC GGGCACGCGT GGCGCGCCCG CGCCTGTGCC
GTGCTCACCG GCATCGGCAC CATCCTTGCG GACGATCCCC GGCTGGATGT GCGGGAGGCC
GAGACGCCAC GCCAGCCCCA TCTGGCCATC ATCGACAGCC ATCTTCAGAC ACCGCCAGGC
GCCCGCTTCT TCGAAGTGCC CCAGCGCCAG ATACTGATCT ACACGGCCAG TGCCGATTCT
GCGAAGGCAG CAGTTCTGCA GGACCGCGGC GCACAGGTCA TCGCCGCGCC GATGGCAGGC
GACGGGCACA TCGACCTGCA TTGGGTGCTG CAGGACCTGG CGCGCCAGCG CAGCGTGAAC
GAACTGCACG TGGAAGCAGG TGCCCGGCTC AACGGCGCGC TCGTGCGTGC CCGGCTGGTG
GACGAGATCC TGCTGTACAT GGCGCCCACG CTGCTCGGAG CCGGCCGTGG CATGGCGCAA
TGGGGCCCGC CGGGCACGCT GGCCGGGGCC CATGCGATGG CATGGCAGGA CATCGATCGG
GTCGGTGCCG ATCTGCGCAT CATCGCGCGG GGAGCGGGGC GGGACGTTTT CTGA
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| Protein sequence | MSVPSAPASP ADLMQLALQL AEDGLYRTSP NPRVGCVLVN AGQQIIGQGS TQRAGGPHAE
VMALRDARAR GHATHGATAY VTLEPCSHHG RTGPCCDALV EAGIARVVAS LADPNPLVAG
QGFERLRGAG VQVEVGPGAA ASRELNIGFF SRMQRGLPWV RMKAATSLDG FTALPDGTSQ
WITSPEARAD GHAWRARACA VLTGIGTILA DDPRLDVREA ETPRQPHLAI IDSHLQTPPG
ARFFEVPQRQ ILIYTASADS AKAAVLQDRG AQVIAAPMAG DGHIDLHWVL QDLARQRSVN
ELHVEAGARL NGALVRARLV DEILLYMAPT LLGAGRGMAQ WGPPGTLAGA HAMAWQDIDR
VGADLRIIAR GAGRDVF
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