| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3553 |
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| Symbol | |
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| ID | 4669345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3926757 |
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| End bp | 3927806 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639824744 |
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| Product | putative transmembrane protein |
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| Protein accession | YP_971878 |
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| Protein GI | 120612200 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4966] Tfp pilus assembly protein PilW |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCGCT TTTCCCATCC CGTGACCCGC CGGTTACGGC AGAACGGCCT CACGCTCGTG
GAGCTGATGG TCGCCATGGT CATCAGCCTG CTGATCGTGC TGGCCGCGGC GGTGAGTCTC
GTGGTCGCCC GGCAGGGCTT CAACAACGTC GATGCCGCAT CGCAACTGCG CGACAACGCC
CGCTTCGTGG AAGACATGGT CCAGCGCCTG GGTGTGCAGG CGGGCTACCG CGACCTGTTC
CATGCCGCCT ACGAACAAAG TGCCAGCACC ACCGGGATCG ATCCGTCGGC GGTGCCTAAT
ACCTTCGTCT ATGGGTTCAA CAACAAGGCG CGCGCATCCG CTGATAACTG GTATGAAGCG
AGCACGAACC GCACATCGGG CAGTGTGGGG TATGGAAGCG ACGTGCTCGT GCTGCGTTTT
CAGCCCGCGA CGTCCAACAG CGAGGCCGCC AAGACGGATA AGGGCATGAT CGACTGCTCC
GGCAACACGC CCCAGGTCGG TGCGAAGGAC CGCTATGACC GGGTGACAAG CGTGCTGCAT
GTCGCGATCA GCAACGACGG CGAGCCGGCG CTGATGTGTA CGACCTGGAT GCGCGATCCC
GGGACAGAAG CTCTCACCAA ATCCGACCCG CTTCCCCTGA TCTCCGGCGT CGAAAATTTC
CAGGTGCTCT ACGGCGTTGA CGGCATTTCC GCCAACAATG CCACGATGCC CGCGGCTTCG
ACAGCGGACA GCGTGCAGGA CCGCTTCCTG CGCGCCGACC AGATCACGGT GTCGAACCCA
TTGGTGTCGG CCGCGAACTG GCGCCGTGTG CGCAGCATCC GCATTGGCAT GGTATTGCGG
GGCGCTCCGA ACTCGGCCGT GGACCGTACA TCCCAGACTT TCTATCCCCT GGGCACCGCG
AAAGGGTCGA GCGGGGGGAG CGTCGGCAGC ATGTTTGCCG ATGCCACCAA CGACCCCGGC
ACCGTATTCA CACCGACGGC GGACGGCCGG TTGCGGCAGG TGGTCACCTT CACAGTGCAT
TTGCGCAACA ACCAGCGGGA GCCTGAATGA
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| Protein sequence | MTRFSHPVTR RLRQNGLTLV ELMVAMVISL LIVLAAAVSL VVARQGFNNV DAASQLRDNA
RFVEDMVQRL GVQAGYRDLF HAAYEQSAST TGIDPSAVPN TFVYGFNNKA RASADNWYEA
STNRTSGSVG YGSDVLVLRF QPATSNSEAA KTDKGMIDCS GNTPQVGAKD RYDRVTSVLH
VAISNDGEPA LMCTTWMRDP GTEALTKSDP LPLISGVENF QVLYGVDGIS ANNATMPAAS
TADSVQDRFL RADQITVSNP LVSAANWRRV RSIRIGMVLR GAPNSAVDRT SQTFYPLGTA
KGSSGGSVGS MFADATNDPG TVFTPTADGR LRQVVTFTVH LRNNQREPE
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