| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3549 |
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| Symbol | |
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| ID | 4665266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3920510 |
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| End bp | 3921115 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639824740 |
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| Product | Tfp pilus assembly protein FimT |
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| Protein accession | YP_971874 |
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| Protein GI | 120612196 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain
[TIGR02596] Verrucomicrobium spinosum paralogous family TIGR02596 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.631889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGAATA ATCTGCACTG CGGATCGCAG GCCAGCCAGG GCCCCAGGAT TGCCAGGCGG
CACCGGGGGT TCACCCTGAT CGAGCTCATG GTGACGATGG CGCTGGTGGC CGTGCTGCTG
CGCATCGGCA TCCCGAGCTT CGTGAGCTTC CAGCGCAATT CCGAACTGAC CTCCGCCGCC
AACGGGCTGC TTGCGAGCGT CAATTCGGCC CGCACGGAGG CCATGAAGCG CAACATGAAC
GCGGGGTTGG TTCCCACCAC GGGCAGTTCA TGGGGAGGAG GGTGGACCGC ATTCGTGGAT
ATCGATGGCA ATGGTTCCTT CGACGCGGCC AAGGACCTGG TGGTGTCAAC GCAACCGGCG
CTGGCGTCTT ATTTTTCCGT GACCGGTACA GGCACCGCGA CAGGCGATAC CCCCTCCATC
ACCTTCAACT CTTCAGGTTA TGTGAAGGAT TTCGGCAACG TCACCCTGGA AATCGCGCGC
AACGATCTTT CCGATGCGGC GCTGCTGGAG CAGACGCGAC GGGTTGTCAT CTTCAAGACG
GGCCGCGTGC GCGTCTGCAA GCCGACGTCC GCGACCGATG CCGCGTGCTC CAGCGGCGGG
AGCTGA
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| Protein sequence | MRNNLHCGSQ ASQGPRIARR HRGFTLIELM VTMALVAVLL RIGIPSFVSF QRNSELTSAA
NGLLASVNSA RTEAMKRNMN AGLVPTTGSS WGGGWTAFVD IDGNGSFDAA KDLVVSTQPA
LASYFSVTGT GTATGDTPSI TFNSSGYVKD FGNVTLEIAR NDLSDAALLE QTRRVVIFKT
GRVRVCKPTS ATDAACSSGG S
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