Gene Aave_3546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3546 
Symbol 
ID4668827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3918031 
End bp3918834 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content67% 
IMG OID639824738 
ProductMCP methyltransferase, CheR-type 
Protein accessionYP_971872 
Protein GI120612194 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1352] Methylase of chemotaxis methyl-accepting proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.203132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.882443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAAACA GAACCATCTC CGATCGCGAC TACGGGCATT TCCAGCGCTT CATCTTCGAT 
GCGGCCGGCA TCACGCTGTC CCCGGCGAAG AAAGCCCTCG TCTGCGGGCG CCTGGCCAAG
CGCCTGCACG CGACCCGGAT GGCGGGGTAC GCGGAATACT TCGCGCTGCT GCAAAGCGGC
CAGGATCCCG CCGAAGTGCA GATGGCGATC GACCTGCTCA CCACCAACGA AACCTATTTC
TTCCGCGAAG CACGGCATTT CGAGCTGCTG CGCAGCGCCG CGCAACAGCC CGGCGGCGCC
TCGCCCTTCC GCGTGTGGAG CGCCGCCAGT TCCAGCGGCG AAGAGGCCTA CAGCATCGCC
ATGGTCCTGG CGGACTGCCG CGGCGGCCAG GCATTCGAGG TGGTGGGCAC CGACATCAGC
ACGCGCATGC TGGACAAGGC CCGCACCGGC CACTACCCCG AGCAGCGCGC CCGCCAGATT
CCCCAGCCCT ACCTGCGGCG CTTCTGCCTG AAGGGCCAGG GGCCCCAGGC GGGAACGCTG
CTGGTGGCGC GCGAACTGCG CCAGAAGGTG CGCTTCCTCC ACGCCAACCT GAACACGAAA
CTCCCCGACC TGGGCAGCTT CGACGTCGTG TTCCTGCGCA ACGTGATGAT CTACTTCAAC
GGCGACACCA AGCGCGACGT GGTGGCCCGC GTGATCTCGT TCATCCGCCC GGGCGGGTAC
CTCTATATCG GCCACTCGGA GAGCCTGCAC GGCATCGACG CCGCCATGGA GCAGGTCGCG
CCCTCGGTCT ACCGCAAGCC ATGA
 
Protein sequence
MPNRTISDRD YGHFQRFIFD AAGITLSPAK KALVCGRLAK RLHATRMAGY AEYFALLQSG 
QDPAEVQMAI DLLTTNETYF FREARHFELL RSAAQQPGGA SPFRVWSAAS SSGEEAYSIA
MVLADCRGGQ AFEVVGTDIS TRMLDKARTG HYPEQRARQI PQPYLRRFCL KGQGPQAGTL
LVARELRQKV RFLHANLNTK LPDLGSFDVV FLRNVMIYFN GDTKRDVVAR VISFIRPGGY
LYIGHSESLH GIDAAMEQVA PSVYRKP