| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3540 |
|---|
| Symbol | |
|---|
| ID | 4668952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax citrulli AAC00-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008752 |
|---|
| Strand | + |
|---|
| Start bp | 3913738 |
|---|
| End bp | 3914406 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639824733 |
|---|
| Product | NAD(P)H dehydrogenase (quinone) |
|---|
| Protein accession | YP_971867 |
|---|
| Protein GI | 120612189 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.312737 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCCC TCATCGTCGT CAGCCACCCC GATCCCCGGT CGCTCACCCA TGCCGTCGCG
CGCTCGTTTG CCGAGGGCGT CGAAGCGCCC GGCCAGCACA CCACGGAGGT GGCGGACATT
GCGGCAGAGG GGTTCCAGCC TGCATTCAAC CCTGCGGACC GGGCCACGTT CTTCATGAAG
GCGTCCGCCC CGCCCGACGT TCTGCGCGAG CAGGAGCGTA TCGACCGGTC CGATGCGCTG
GTGCTTGTCT ATCCTGTTTA CTGGTGGTCG TTTCCAGGGC AGCTCAAGGG CTGGATCGAC
CGCGTTTTCT CCAACGGGTG GGCCTACTCG CAAACGCCGG AAGGAGCCAT CGAGAAGCGG
CTCGGGCGTC TTGCGGTCCA CCTGCTCGGC ATCGGAGGTG CCGACGAGGG AACGTATGCG
CGGCACGGCT ACGACAAGGC GCTGCGCACG CAGGTCGATC ACGGCATCTT CGACTACTGC
GGCGCCAGGG TGGCCACTTC CACGATCCTC CATGGCACCG ACGGCGCGAG CGCTGCATCC
CACATCGCCA CCGCGCGTGA ACTGGGTCGC AACGCGTTCG CGCGACAGGT CGCCGCAGGC
GGGCACCCGG CGCCTGAAAT CGGCGGCAAG TTCGGGCAGG GGGATCGCGG AGCAACGCTG
GAGCAGTAA
|
|---|
| Protein sequence | MHALIVVSHP DPRSLTHAVA RSFAEGVEAP GQHTTEVADI AAEGFQPAFN PADRATFFMK
ASAPPDVLRE QERIDRSDAL VLVYPVYWWS FPGQLKGWID RVFSNGWAYS QTPEGAIEKR
LGRLAVHLLG IGGADEGTYA RHGYDKALRT QVDHGIFDYC GARVATSTIL HGTDGASAAS
HIATARELGR NAFARQVAAG GHPAPEIGGK FGQGDRGATL EQ
|
|---|
| |