| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3523 |
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| Symbol | |
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| ID | 4666988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3893802 |
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| End bp | 3896420 |
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| Gene Length | 2619 bp |
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| Protein Length | 872 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 639824717 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_971852 |
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| Protein GI | 120612174 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.738639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATC CTGCCCCTTC GCGCCGGGCT TTCCCGCACC GCGGCCATTC GCTGCTGCGG
CGCCTGCTGC CCGCCATCGG GGCGCTGCTG GTGCTGATCG GGCTGGGGGC CTACCTGCTG
GTCACCAATG CGCTCAGCCA GGATGCCGAC GTGCAGGCGC GCTCGCGGAC TTTCATCGCC
CGCAGCCTGG AGCAGCAGCG CAACGAGACG GGCCGCAACA TCATCAACTA CAGCAAGTGG
GGCGAGGCCT ACCGCCACCT GCACCTGACC GTGGACAAGG TCTGGGCGGA CGAGCACCGC
AACGTGGGCG ACATCCCCTT CGATCTCTAC GGCTACAACG GCGTGTGGGT CGTCGACGGC
GCCGGCCGCA CGGTGTACGG CGTCATCGAC GGCAAACCCA CGTCGCGGCA GATCACCGGC
TGGCTGCAGG GCGACGTGGC CGGCCTGCTG GCGGCGGCGC GGGAAAGCGA CGTGCAGGAC
GGCAGCGTCG TGCGCGCGCT GGAGGTGGGC GGGCTGCCGG CGATCGCCGC GGCGGCCACC
ATCACGCCGG GCTGGGATTC CTCGATCCCC GTCATGCCGG GCACGCCGTC GGTGATGATG
TTCGTCACCG TCCTGGACCC GGCGTGGCTC GCGCGGCTGA GCGAGCAATA CGGCGTGCCC
GCGCTCACGG CCTCGCACGG GCCGCTGCCG GGCCACGAAT CGATGCCGCT GCTCGATTCG
CCATCCATCC ACCTGAACTG GCACCCGCCC CAGCCGGGCC GCGACCTGCT GCGCCAGACC
CTGCCGCTGT TCGCGGGCGG CGTGCTGCTG ATGCTGGGCG TGCTGGTGCT GCTGCTGCGC
AACGCGCTCG CGTCGGCCCG GCAGATCGAC GCGCAACTGC AGGCCCTGCG GGCCAGCCAG
GCCGAACTCC AGGGCAGCGA GCGGCGCTTC CGCGACATGG CGGAGACCTC CTCGGACTGG
CTGTGGGAGA CGGATGCGCA GGGCCGGCTG ACCTATCTCT CCGACCGCTT CTCGCAGGTC
GCCGGGCACC GCCGCGGCGA CTGGCTGGGG CGGCCGCTGG CCGACCTGTT GCGGCCCGAG
GGGGGACAGC CGCTGCAGCC CTGGCTGGAG CGCGCGGACG GACGGGGCCC TGCCGAAGCC
GACGGCGCCG CACGCGACAC CCTGCTGTGC CGCATCGACG ACAGTTCCGG CCTGCAGCGC
ATCTGCCGCG TCACGGCGCG GGCGATCGGG GAGGGGCAGG GCTTCCGCGG CACCGCCACC
AACCTGACCG ACGAATGGCA GGCACAGGCC CGGGTGCGGC ACCTCTCGCT GCACGATACG
CTCACCGGCC TGCCCAACCG GCGGCGGCTG CACCAGTTCC TGGCCACGCT CCTGGAGTCG
GACGGTCCGG CGCAGCCGCT GGCGCTGCTG TGCCTGGACC TCGACCGCTT CAAGCCCGTC
AACGATGCGC TCGGCCACGC CCTGGGGGAC CGGGTGCTGC AGGAGGTGGC CCGGCGCCTG
CAGGCGCTGC TGGGCCCGCA GGATATCGCC GCTCGGCTGG GCGGGGACGA GTTCGTGCTG
GTGCTGGCCG GCGCGCAGGA CCCCGATGCC ATCGGCCGCC GCTGCGCCGC CGTGGTGGCC
GCGCTGTGCG AGCCTTTCGC CTTCGACGGC CAGATCGTCT GCATCGGCAC CAGCATCGGC
GTGGTGCAGG CGCCGCTGCA TGCGCGCACT GCGCAGGAGC TGCTGCGCAA GGGCGACATC
GCGCTCTATG ACGCCAAGGC GGCCGGCCGC AACACCTGGC GCTGTTACAC CGACGCCCTG
GACGCGCAGG CCGCCGCGCG CCTGCGGATG GAGCAGGACC TGCGCGTGGC GCTGCGCACC
GGGCAGATGC GCCTGCATTA CCAGCCCTGC TATGCGGTGG ACGGCGGAGC GCTGCGCAGC
CTGGAGGCGC TGGTAAGGTG GCAGCATCCC GTGCGCGGAA TGCTGCAGCC CGAGGAGTTC
CTGCCCCTGG CGCGGGAAAC CGGGCTGATC CGTCCGCTGG GCGAGTGGGT GCTCCGCACG
GCGTGCCTCG ATGCCGCGGG CTGGCCCCGC GGCGTGCGGG TGTCGGTCAA TCTCTCGGCC
GGCCAGTTCG GCAGTGCCGG CCCGCAGGCG GCCGACCTGC CGTCCGTGGT GGCCGCGGCC
CTGCGGGACA GCGGCCTGCC GGCCCGCAGG CTGGAGCTGG AGATCAACGA AGGCATCCTG
CTCACTCATG GCGACGAGGC CCTGCAGGCC CTGGCAGCGC TCAAGCAGCA GGGGGTGTGG
CTGACGCTGG CCGACTTCGC CTCGGGCTAT TCGTCGCTGG CCTGCCTGCG CCACCTTCTG
CCCGACGGCA TCAAGATCGG CCGTGGCTTC GTCGCGCAGT TGCCCGAGCG CGCGCAGGAC
CGGGCCATCG TGCAGGCCGT GGGCGCGCTC GCGCATGCGC TGGGCGTCTC GGTGCGGGCG
GAGGGCGTGG AAACCCGCTC GCAGCTCGAT TGCCTCATGC GCCAGCCCTG CGACGAAGTG
CAGGGCTTCC ATTTCAGCGA TGCGCTGCCG CCGGAGCAAC TGGACCGGCT GTGGGGCGCC
GCTGCGGCTT CCGGGCCCGG CGCTGGCGCA GGCGCCTGA
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| Protein sequence | MNDPAPSRRA FPHRGHSLLR RLLPAIGALL VLIGLGAYLL VTNALSQDAD VQARSRTFIA
RSLEQQRNET GRNIINYSKW GEAYRHLHLT VDKVWADEHR NVGDIPFDLY GYNGVWVVDG
AGRTVYGVID GKPTSRQITG WLQGDVAGLL AAARESDVQD GSVVRALEVG GLPAIAAAAT
ITPGWDSSIP VMPGTPSVMM FVTVLDPAWL ARLSEQYGVP ALTASHGPLP GHESMPLLDS
PSIHLNWHPP QPGRDLLRQT LPLFAGGVLL MLGVLVLLLR NALASARQID AQLQALRASQ
AELQGSERRF RDMAETSSDW LWETDAQGRL TYLSDRFSQV AGHRRGDWLG RPLADLLRPE
GGQPLQPWLE RADGRGPAEA DGAARDTLLC RIDDSSGLQR ICRVTARAIG EGQGFRGTAT
NLTDEWQAQA RVRHLSLHDT LTGLPNRRRL HQFLATLLES DGPAQPLALL CLDLDRFKPV
NDALGHALGD RVLQEVARRL QALLGPQDIA ARLGGDEFVL VLAGAQDPDA IGRRCAAVVA
ALCEPFAFDG QIVCIGTSIG VVQAPLHART AQELLRKGDI ALYDAKAAGR NTWRCYTDAL
DAQAAARLRM EQDLRVALRT GQMRLHYQPC YAVDGGALRS LEALVRWQHP VRGMLQPEEF
LPLARETGLI RPLGEWVLRT ACLDAAGWPR GVRVSVNLSA GQFGSAGPQA ADLPSVVAAA
LRDSGLPARR LELEINEGIL LTHGDEALQA LAALKQQGVW LTLADFASGY SSLACLRHLL
PDGIKIGRGF VAQLPERAQD RAIVQAVGAL AHALGVSVRA EGVETRSQLD CLMRQPCDEV
QGFHFSDALP PEQLDRLWGA AAASGPGAGA GA
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