Gene Aave_3515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3515 
Symbol 
ID4666485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand+ 
Start bp3886776 
End bp3887456 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content69% 
IMG OID639824709 
ProductGntR family transcriptional regulator 
Protein accessionYP_971844 
Protein GI120612166 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.715745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.6161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAT CCCCCGTACA GAACCTGACG GACCGCGTCA GCGACCAGAT CCGCCGCCGC 
ATCGTGGCCG GCGAGCTGGC CCCGGGCCAG CGCCTGTCCG AGGCCGCGCT GGCCGAGAGC 
CTGGAGATTT CGCGCAACAC CCTGCGCGAG GTGTTCCGGC TGCTCACCAA GGAGGGCCTG 
CTCCGGCACG AACCCAACCG CGGCGTGTCG GTGGCGGTGC CCAGCATCGC GTCCATCATC 
GACATCTACC GCGTGCGCCG GCTCATCGAA TGCCAGGCGC TGGCCCAGGC CTATCCGCGC 
CACCCCGCCA AGAAGCACCT GCGCGAGGCG GTGGACAACG CCCTGCGCTG CCGCGACGCG 
GGCGACTGGC AGGGCGCGGG CACGGCGAAC ATGGAGTTCC ACATGGCCGT GGTGGAACTG 
GCCGACAGCG AACGCCTGAA CGTGATGTTC TCCCATCTGC TGGCCGAGCT GCGCCTGGCC 
TTCGGGCTGC TCAAGGACGC GGAATTCCTG CACGCGCCCT ACGTGGAGAT GAACGTGAAG 
ATCGTCGAGC TGTTCGAGGC CGGCAGGCTG CAGGAGGCCT CGGCCGCCCT GCACGACTAC 
CTGGTGCATT CGGAACGCAT CGTGCTGGCC GTGTACGCGC GGCGGATCTC CGAGCCGGGG 
CTGGAGCGCG GCACCCGCTG A
 
Protein sequence
MSESPVQNLT DRVSDQIRRR IVAGELAPGQ RLSEAALAES LEISRNTLRE VFRLLTKEGL 
LRHEPNRGVS VAVPSIASII DIYRVRRLIE CQALAQAYPR HPAKKHLREA VDNALRCRDA 
GDWQGAGTAN MEFHMAVVEL ADSERLNVMF SHLLAELRLA FGLLKDAEFL HAPYVEMNVK 
IVELFEAGRL QEASAALHDY LVHSERIVLA VYARRISEPG LERGTR