Gene Aave_3511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAave_3511 
Symbol 
ID4665658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax citrulli AAC00-1 
KingdomBacteria 
Replicon accessionNC_008752 
Strand
Start bp3881945 
End bp3883564 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content76% 
IMG OID639824705 
Productallophanate hydrolase subunit 2 
Protein accessionYP_971840 
Protein GI120612162 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1984] Allophanate hydrolase subunit 2
[COG2049] Allophanate hydrolase subunit 1 
TIGRFAM ID[TIGR00370] conserved hypothetical protein TIGR00370
[TIGR00724] biotin-dependent carboxylase uncharacterized domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.80956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.701023 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCTTCC TTCCCGTCAA CCTCGATGCC CTGCTGGTCG AGCTGGACGA CCTGCAGCAG 
ACCCTGGCGC TGCATGCCTC GCTGCGGCGC GACCCCATCG CCGGCATCGA AGAACTGGTG
CCGGCCGCGC GCACCGTGCT GGTCCGCTAC CGGCCTGCGG CGCAGGGCTT CGCCGCCCTG
GTCGATGCGA TCGCCCGGCG CGACGTGCGC GGCGAGGCGC AGCGCAGCGA CACGCTGGTG
GAGATTCCCG TGCGCTACGA CGGCGAGGAC CTGGCCGAGG TGGCGCAGAG GCTGGGCATC
ACCCCCGACG AGGTGGTGCG CCGCCACACC GGCAGCGAAT ACACCGTGGC CTTCACGGGC
TTCGCGCCCG GCTTCGGCTA CCTGGCCGGC GGCGATCCGG GCCTGGACGT GCCGCGGCGC
GCCACGCCGC GCACCCGCAT CCCGGCCGGC GCCGTGGGCC TGGCCGGCAC CTTCAGCGGC
GTCTATCCGC AGGCCAGCCC GGGCGGCTGG CAGATCATCG GCACCACGCC CGTGGCGATG
TGGGACATCG ACCGCGATCC GCCCGCGCTC CTGCAGCCCG GCGCGCGCGT GCGCTTCGTG
GACATCGCCA CGCTGCCGGC ATCGGCGCGG GAGGCCCTGG AGGCGGTGAA GCCTGCGGCG
CCCTCCGCGT CCGGATCCGC ATCCGCCACG CCGGACACCG GCGCGCAAGG GCCCGCACTG
CGCGTGCTGT CCGCGGGCCT GCAGACACTC TTCCAGGACC TGGGCCGCCA TGGCCATGCG
GGGCAGGGGG TCTCGGCCTC CGGCGCCATG GACCGGGCCG CCTGCCGCGC CGCCAACCGG
CTGGCGGGCA ATCCCTCCGA TACCGCCTGC CTGGAGACCG TGCAGGGCGG CCTGCGCCTG
CGCAGCCAGG GCGAGAACGT CGTGGCCGTG GCCGGCGCGG ATGCGCCCCT GTGGTGCACG
GCCGCGGACG GACGGCGCTG GCCGTTGCCG CGCTACGCGC CCGTGGCGCT GGCGGACGGC
GACGAACTCG CCATCGGCGA GCCGCATGCC GGCGCACGCT GCTACGTGGC GGTGCGCGGC
GGCTTCCGCG TGATGCCGGT GCTGGGCAGC TGCGCCACCG ACACCCTGGC CCGCGTGGGG
CCCCCGGCCG TTGCCGCGGG CGACGTGCTG CCCGTGCGCG TGCCGCAGGG GTTGCCGGCC
GTCGGGGCGG CAGAGTTGCC CCCGGACGGC CTGCCCCGGG CCGGCGGCGA AGTGGTGCTC
GATTGCGTGC CGGGGCCGCG CACCGACTGG TTCACGCCCG AGGCCCTGGC GCTGCTGGCC
TCCCAACGCT GGCAGGTCAC GCCGCAATCC AACCGCGTGG GCCTGCGCCT GGCGGGCGAT
ACGGCGCTGG CCCGCGCCGT GCAGGGCGAA CTACCCAGCG AGGGCGCTGT GGCCGGCGCC
ATCCAGGTGC CGCCCAGCGG CCAGCCCGTG CTGTTCCTGG CCGACCATCC CCTCACCGGC
GGCTATCCCG TCATCGGCGC CGTGGCGCCC CACCACCTGG ACCTGGCGGG CCAGATCCCG
GTGAACGCAT GGGTGCGCTT CCGTCCCATC CGGGCGTTCG AGCCGGTCAC GCGCCCGTGA
 
Protein sequence
MRFLPVNLDA LLVELDDLQQ TLALHASLRR DPIAGIEELV PAARTVLVRY RPAAQGFAAL 
VDAIARRDVR GEAQRSDTLV EIPVRYDGED LAEVAQRLGI TPDEVVRRHT GSEYTVAFTG
FAPGFGYLAG GDPGLDVPRR ATPRTRIPAG AVGLAGTFSG VYPQASPGGW QIIGTTPVAM
WDIDRDPPAL LQPGARVRFV DIATLPASAR EALEAVKPAA PSASGSASAT PDTGAQGPAL
RVLSAGLQTL FQDLGRHGHA GQGVSASGAM DRAACRAANR LAGNPSDTAC LETVQGGLRL
RSQGENVVAV AGADAPLWCT AADGRRWPLP RYAPVALADG DELAIGEPHA GARCYVAVRG
GFRVMPVLGS CATDTLARVG PPAVAAGDVL PVRVPQGLPA VGAAELPPDG LPRAGGEVVL
DCVPGPRTDW FTPEALALLA SQRWQVTPQS NRVGLRLAGD TALARAVQGE LPSEGAVAGA
IQVPPSGQPV LFLADHPLTG GYPVIGAVAP HHLDLAGQIP VNAWVRFRPI RAFEPVTRP