| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3499 |
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| Symbol | |
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| ID | 4665394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3867276 |
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| End bp | 3868856 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639824693 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_971828 |
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| Protein GI | 120612150 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | [TIGR03409] urea ABC transporter, permease protein UrtB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.627078 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCAT CCCTATTTCA CCGCCTGATC GCCTGCCTGC TGCTGTGCGC GGCGGCACAG
GCGCATGCGC TCACGGCGGA GGCGGCGCGG GCGATGGCCG CGGGCGATAC CGACGAGCGG
ATCGCGGCGC TGCAGCAGGC CGTGGCCGCG CCGGACGACG CCACGGTGGC CTTCATCCGC
GCCATGGCCG ACGATGCGGT GAAGATCGCG GGTGGCCGGG CCATCGTGGT GAAGGACGGG
CAGGGCGCCG ATCCCGTCAC CGGCGCGCCG GTGGACGTGC CGGAGGATGC GGAGGACATC
GTCAACAACA ACCGCATGCG CGGCGAATTC GACACCGCGC TGGCGTCGCT GCAGCTCATG
TCGCCGGATG CGGCGCAGCG CCGCGCGGCG ATCGACGCGC TCAGGGACGA GAGCGACGAG
GCGCGCCTGC CCCTGATCGA CAAGGCCCTG GCCGCCGAGC GCGAGCCGGG GCTCAAGGCC
CGGCTCGAGG CGATCCGCGC GCGCATCCAG CTCTCGGCGA GCGACCCGGC GCAGCGCCAG
CTGGCGGCGC AGGCCCTGGC CGGCAGCGGC AACCCGGCCA CGCGCACGGT GCTGCTGGAG
CAACTGCGCA ACGAACAGGA CCCGAAGGTG CGCGCGGCGA TCGATTCCGC GCTGAAGGCC
GTGGAAGCGC GGCTGCAGTG GGGCGAGCGC CTGGGGGCGC TGTTCTCGGG CCTCAGCCTG
GGATCCATCC TGCTGCTGGT GGCGCTGGGC CTGGCCATCA CCTACGGGCT GATGGGCGTC
ATCAACATGG CCCATGGCGA ACTCATGATG ATCGGCGCCT ACGCCACGTA TGTGGTGCAG
GGGCTGTTCC AGCGCTACCT GCCGGGCGCC TTCGATGCGT ACCTCGTCGC GGCCGTGCCG
GTCGCATTCC TCGCGTCGGC GCTCATGGGC GCGGTGCTGG AGCGCGGCGT GATCCGTTTT
CTCTACGGCC GGCCGCTGGA GACGCTGCTG GCCACCTGGG GCATCAGCCT GATGCTGCAG
CAGTTGGTGC GCAGCGTGTT CGGCGCGCAG AACGTGGGCG TGGAAAACCC CGCCTGGATG
AGCGGCGGCG TGCAGGTGCT GGAGAACCTG CAATTGCCGT GGAACCGGCT GGTGATCGTG
GTGTTCGCGT TCGCCGTGCT GGGCGGCGTG GCCTTCCTCA TCGGCCGCAC GCGGCTGGGC
CTGTTCGTGC GCGGTGTGAC GCAGAACCGC CCGATCGCCT CGTGCATGGG CGTGAACACC
GCGCGCGTCG ATACCTATGC CTTCGCGCTG GGCTCGGGCA TCGCGGGCCT GGCGGGCTGC
GCCCTGAGCC AGGTGGGCAA CGTGGGGCCG GACCTGGGGC AGGGCTACAT CGTGGACGCC
TTCATGGTGG TGGTGCTGGG CGGTGTCGGC CAGCTCGCGG GCACCGTCTA TGCCGCGCTG
GGGCTGGGCG TGCTCAACAA ATTCCTCGAG GGCTGGGCGG GCGCGGTGCT GGCCAAGATC
GCCGTGCTGG TCCTCATCAT CGTCTTCATC CAGAAGCGGC CGCAGGGCAT CTTCGCGGTG
AAGGGGCGCG CTGCGGACTG A
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| Protein sequence | MFSSLFHRLI ACLLLCAAAQ AHALTAEAAR AMAAGDTDER IAALQQAVAA PDDATVAFIR
AMADDAVKIA GGRAIVVKDG QGADPVTGAP VDVPEDAEDI VNNNRMRGEF DTALASLQLM
SPDAAQRRAA IDALRDESDE ARLPLIDKAL AAEREPGLKA RLEAIRARIQ LSASDPAQRQ
LAAQALAGSG NPATRTVLLE QLRNEQDPKV RAAIDSALKA VEARLQWGER LGALFSGLSL
GSILLLVALG LAITYGLMGV INMAHGELMM IGAYATYVVQ GLFQRYLPGA FDAYLVAAVP
VAFLASALMG AVLERGVIRF LYGRPLETLL ATWGISLMLQ QLVRSVFGAQ NVGVENPAWM
SGGVQVLENL QLPWNRLVIV VFAFAVLGGV AFLIGRTRLG LFVRGVTQNR PIASCMGVNT
ARVDTYAFAL GSGIAGLAGC ALSQVGNVGP DLGQGYIVDA FMVVVLGGVG QLAGTVYAAL
GLGVLNKFLE GWAGAVLAKI AVLVLIIVFI QKRPQGIFAV KGRAAD
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