| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aave_3498 |
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| Symbol | |
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| ID | 4669901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax citrulli AAC00-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008752 |
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| Strand | - |
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| Start bp | 3865949 |
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| End bp | 3867106 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639824692 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_971827 |
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| Protein GI | 120612149 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0949204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.569267 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTC CAAACCCCAT CCCATTGCCT GCACCGGCAC CGCTGCTCAC GCGCGGTGGG
TGGACGGGCT TCATCGTGGC GCTGATCGCG GTCTGCGCGG TGGCGCCCGT GCTCAACCTG
TGGGTGCCGG CCGGCAGTGC GTTCCATCTT TCGGACTACG CTGTGGCCCT GGTCGGCAAG
ATCATGTGCT ACGCCATCTG CGCGCTGGCC ATGGACCTGA TCTGGGGCTA CACGGGCATC
CTGAGCCTGG GCCATGGGCT TTTCTTCGCG CTGGGCGGCT ATGTGATGGG CATGTACCTC
ATGCGCCAGA TCGGCCGCGA CGGCAACTAC AAGAGCGACC TGCCCGATTT CATGGTGTTC
CTGGACTGGA AGGAGCTGCC CTGGCACTGG GCGCTGTCGG ACAGTTTCAT CGCCACGCTG
GTGCTGATCG TGGCCGTGCC GGGGCTGGTG GCGTTCGTGT TCGGCTACTT CGCCTTCCGC
TCGCGCATCA AGGGGGTGTA TTTCTCGATC ATCACGCAGG CCATGACGTA TGCGGCCATG
CTGCTGTTCT TCCGCAACGA GACGGGCTTC GGGGGCAACA ACGGCTTCAC CGACTTCAAG
CGCATCCTGG GCTTTGCCCT AGCCACGCAA CACATGCGCA TGCTGCTGTT CGTGCTCACG
GGGCTGGCGC TGCTGGGCTT CTTCCTGCTG GGCCGCTGGC TGGTGGGCTC CAGGTTCGGC
CGCGTGCTGC AGGCGATCCG CGACGCGGAG ACCCGCGTGA TGTTCTCGGG CTACTCGCCG
CTGCCCTACA AGCTCGCCAT CTGGACCATC AGCGCCATGA TGTGCGGCGT GGCCGGCGCG
CTCTACGTGC CGCAGGTGTG CATCATCAAC CCGGGCGAGA TGAGCGCCGC CAACTCCATC
GAGATCGCCG TCTGGGCGGC CGTGGGCGGG CGCGCGACGC TCGCCGGCCC GATCGCGGGG
GCCTTCCTCG TCAACGGCGC CAAGAGCTGG CTGACGGTGA CGGCGCCGGA GTTCTGGCTG
TATTTCCTGG GTGCGCTGTT CATCGCCGTC ACGCTGTTCC TGCCGCAGGG CGTGGCGGGG
CTGCTGCGCT CGCCCGGCGG ATGGCGCGGT CGCATGGCGA AGGCCCTGCG CAAGGAAGAA
GGAGGCGCCG CGCGATGA
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| Protein sequence | MTIPNPIPLP APAPLLTRGG WTGFIVALIA VCAVAPVLNL WVPAGSAFHL SDYAVALVGK
IMCYAICALA MDLIWGYTGI LSLGHGLFFA LGGYVMGMYL MRQIGRDGNY KSDLPDFMVF
LDWKELPWHW ALSDSFIATL VLIVAVPGLV AFVFGYFAFR SRIKGVYFSI ITQAMTYAAM
LLFFRNETGF GGNNGFTDFK RILGFALATQ HMRMLLFVLT GLALLGFFLL GRWLVGSRFG
RVLQAIRDAE TRVMFSGYSP LPYKLAIWTI SAMMCGVAGA LYVPQVCIIN PGEMSAANSI
EIAVWAAVGG RATLAGPIAG AFLVNGAKSW LTVTAPEFWL YFLGALFIAV TLFLPQGVAG
LLRSPGGWRG RMAKALRKEE GGAAR
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